Gene
| Gene Model ID | pfu_aug2.0_648.1_27628 |
|---|---|
| Locus | scaffold648.1 : 80741 ... 117965 : - |
| To GenomeBrowser | scaffold648.1:80741..117965 |
| Genes list of scaffold | scaffold648.1 |
| Synonym | pfu_aug1.0_353.1_65368 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_648.1_27628.t1 | 1 | 1 | zf-rbx1 | 2049 | 2099 | 4.1e-07 | 30.0 | 9.0e-10 | 1.2e-06 | 28.5 |
| pfu_aug2.0_648.1_27628.t1 | 1 | 1 | zf-C3HC4_3 | 2055 | 2102 | 1.1e-06 | 28.1 | 1.6e-09 | 2.2e-06 | 27.2 |
| pfu_aug2.0_648.1_27628.t1 | 1 | 1 | zf-RING_2 | 2057 | 2099 | 3.6e-12 | 45.8 | 6.8e-15 | 9.1e-12 | 44.6 |
| pfu_aug2.0_648.1_27628.t1 | 1 | 1 | zf-C3HC4_2 | 2058 | 2098 | 3.3e-08 | 33.4 | 5.5e-11 | 7.4e-08 | 32.2 |
| pfu_aug2.0_648.1_27628.t1 | 1 | 1 | zf-RING_5 | 2058 | 2100 | 3.6e-07 | 29.8 | 5.4e-10 | 7.3e-07 | 28.8 |
| pfu_aug2.0_648.1_27628.t1 | 1 | 1 | zf-C3HC4 | 2058 | 2098 | 8.1e-07 | 28.5 | 1.4e-09 | 1.9e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_648.1_27628.t1 | gi|676449342|ref|XP_009052024.1| | hypothetical protein LOTGIDRAFT_231602 [Lottia gigantea] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_648.1_27628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_648.1_27628.t1 atgaactttgtaagacctcctgtccctgcaccacccaccatgccggtacagcaccccatgcccagccaggcctctatggg atacgcccctggtgtggggatgttctatccaggacagcctttagcaggaccaccactctcatacaaacaggactgtatca atcctcaactttcccatgcaggtgcaggctaccaggctggttctatgtatagaccacagtacccggccattaaccctaca atgccagcatatggttatctacctcagcaggcatataaccctactcccctccaacctgcagctgaagcattccctggcaa gccattatacactactggtgatagcacatactggtctgttactccacctccaagcttatccagctttagcacagctaaga ctgatgtagctaatcctccagttgctagcccacctgtagctagtcctcctgtagctagctgtgtaactagccctgtagct aaccctatagttagtcctgtatatggtagtggcatccctagtgttagtcctagccgaccagcttctccgtcatttagttc ttttcagtcaccgcctcctagtttatcaccgtctaccagggctcttgccgcattgattagcgaaaatctcaaacggcaac ttgtgtctccttacaggcctaagagtcctatatctgattccaccaatgtgctctcacgctctcctggacacttaacctac ccagcgactccaccttctgacgccaaagtaatgcaggctacaactgtcagtactgttacagcgggtacaagtgcaccctt tgtatcatatgtgatgcctgtatctagtgctagtactaagatgccaacatcaagtagtcaaaaaggtttcacagttaagg aaacatttgaatccaaagccagtcagcatggcatttctatcaataaaacagaaaatgagcttgcagaaaggcgacccaag gggaatttatcgaaggtgcctttagacagcagagcaacagaggaagccctgaataaattcagagctgaactattcgaaac caaagcaatgtcttgtggtatccgagtcgtggatccaaatgagaaaacaaaatcagataagccttcgagtggcatgagca aaagtcaagatgataatatgtctgatgatactccagttttaagtcttcaggaatccttaggctccatgtccgattatgtc agagaaaatgatgaagagctcggtattcgaggaaataatttaatgagattgttagctaggacaagatcattgtctgaatc atcattaggctcgtattttagtgacattgattttgagccgacagggattgagggtaacgagaaacaaagtgctctggaag agatgatcgaaaagcttgtggcaaaagcaatatcggaagcagttagtgaggttctgttcgaaaatcagtgtaaactggac gttaaaagtgatgagaaggagatatgtgaagagaataacaagggaatagagaagtataaagaggaagatgaggaatgtgg aaaggtagaaaaaattgccaaagaaaatgagaaaggaaatgaaaagggtaatgaaacaaaatctgaaagtgaagtgacga aagaaaatgaaataaacaaacttgaatgtgatgttacatctgaaggagaacacaaaaaagatgaagaaaatgtagtcaaa gatgattgttgtaagaaagacgagaaatgtgtgaagaaagatgaaactgtctctgagaggttaacttttaaaactgagaa ggacttaaaagatgatgctagcagtatagacttaaatccaagatccccagttttcaaacctagaaaagtaaaggagtggg cacaggagcccaagatagagtccgatttgaatcctagtgtaccggagtttacacccttgagcttctcgctttcccagcat agtgacctaagtctaagtggttcagacccaggttacatgtataatgaagattattcatcgtatagtggaagtaggtatcc tagaactatagaaagccatatggacatgtatttatctcataaccgtagaacgtatcctaaaaatagatcaatccagaccg attcagccatcttgatagatactgccagcaacacacgacaagtgaagttgaaggaccaaggtatggacacaaagtcttgt gataaaagggatgtctgtattaacactatggaaagttacgagattgaagaagatgaccgagtgataaatatctacgaaaa gaaagatcaggaaaccatgactacgaaaaagaaaacaaaatcaaaggttaccatggtgacagatgaagaccctgacttgg aaagtgttccgtcaccaaggaaagcgtatgaaatcggcctgagagagaaactactaaaaactcaaggtgaattgttgaga ttgaggggaaaggtctgcctagatgaattacacaaacaaatccatcaactggagaagaataagaacagatgggaagatca gttctcatctttgtatcagttccgtccattagcgtctgtgatagatacccagatcagcaaacttaaagttgatggtaaat tgaaaagttgtgaggaccaattagaagcaggagagatgctcataccagatgtaccgtgctttgctgttagtctaccaata gggcccactgaagttcatgttgtcaatagagagagaatgcctaggatacattccagtaatgaagaccagtctactcatgc caatccctttgtcagtacctcacctaaacattctgtgataaactctgccggttatactgaactttctgtctcggaaacaa gtaacattaatgatgtttacgtgaagcaaggacatgatctgttaagtggacgagggaaggctaacaacttactcaaggaa gatgctaatacctccatgggatttgagccatctgttgacaggatagatctagcatcaactggtgatatgaaggtaaagcc ctctgatgttggaggcacgtttgatcagcctgtgagcatcaaaccagctccctgccttgacctgacaaagccagctttat ctgcctcactgcagcatgtaccagaaacaaaatttacatctattccccaacaacaaacaagtctgttaagcttggataaa tttgatgaggacagtgatgaacttcaaccacatcttcagtctcccaaagttgatgcagtctcgactgattttgattacat tccaacaaataccggtgttttagattcttcctcaatagcctcaaggggagggtggtcttcgatctcagatgtgaaaagag acattgactttaatgaacactcacaagaaactaatatgtcaagtaattacacagattcagcttctaatgttgaacttgat ttgaatgtgctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnngagtaaggaacaagagcaggatgtgaaagatagcgccattgaagaggaaagtttgtctgttata agtgacaatttgacagaaagtaaagaaggagcagttaacattcctctgtcaaaggataaaacctcatccatgtcagagca aaatcagttgcctttatctagtctaggtgcaacagttgaaactgccgtgccaacacaaccaagtcaagcagctgtagatc ctaagctgtttgaatctgtgctgaacgaactgatgaaagcatatccccatctgacagccaatcctcttgtattacagtca atagccatgcagcaaacactggtgcttcaagaattcatcagcagaaatagtgggcaggtattgccaaatctggctggctc tagtaatgacttgacactgcaaccaagtacatccaatttaaatcttggatcagttagggagaactctcctaatgaaagtg ttgacactgttgaatctggcgcctcgaaggcaccccctggatttacagaaaaagtagatgaaattccagaccaagattta aatgcagacatcgctagtgaatcagccctcttggagtcgttaatggctaaatctccggacaagaagaagaaactgatttc tattcctctaccttgtaatccactaggaatcccttcagtgaatacttctccgacaaaaagcgcgactggaagtataaatg gagatcaggccggtacatccaaactaccttacaacctcagtatgtcaaattacgttcatgttacggctggtgtacaggat ggtagcccagaaaaagataggggaataccagcgattgatacagttgttgaagggacacgtcaaaactctatactttctaa gaacactgatgaactttcaaaagaagttgactggaatgacaataatctggaagtcaagaaatcagaacctcagctgtcat cagcaaatgaacaaagcaaaactttgaacaaagcacctaatacagattatacagttagtgatagaaaagacaatccatat gcacaaatctcaaagccactgaatgagagtgcatggaagcaaaccacaaacaactactcttcatctaattcaaatcaagt actaaaccagtggagcaatgcagaaaatattgctcccaaaagtaacaaagtagcaagtgcagcaattgtgaatggggatc aaatgagtggtaaagtgaaacaatccaccaagacctcacagtcgaaggcattagatacaggtaaggaccaaggggattgg tggggtacagaatctgaccacatggagtcacacggtgatcatgtgactaatactaagtcacatgattatgatgatcatgt gactagcacaaagtcacataatttaacagaatttggcagtcagggagtatcaggtagtaaagtgaaggactggttagaag gagtgtctacatttgtagaagagccggctcccaagatgccaaacgcttggctgaatagagagaaagtgaaagccattgat cccttcacaccaaaatggatgagaagccctgaagcaaagccaccaaagaaatcacaacttgacccctttgcaccaaaatg gatggagagtgaagcagccttaggaactattggaggattagagaccataccaccagtacctgacactgcagcagcaccag tggtcagtcagaaagagaaagaagaggtcaaggacgatgtagaggagatgaaagaggaaacagaggactggactcaggta acaaagaagggaaagaagcaaaagccggataccccaccgccgcccccagcacctgttgttaaacagaagaagttagtaca gatggtcaccaataaggctgtaaaggaacagcggtctaataactttgagagacttatagccaagcttcaggaagtcccaa agtttgcgtcatacacaagagagggtattatagagctgataacagtagtgagatctgagaggggagggctgagtggactg actaccatggacatagtcaatgctgccttacaggtagctagcagacctagctttgaacgcagattcaagccacagatggc agatgtggttcagtcaggaaagaaacctttgttacccacgccaaccaatataaggaagcctctactacctctacctcctt acccatcaaatactgccatgacgtgctacaatcaggtaacaaagaagggaaagaagcaaaagtcggataccccaccaccg cccccagcacctgttgttaaacagaagaagttagtacagatggtcaccaataaggctgtaaaagaacagaggtctaataa cttcgagagacttatagccaaacttcaggaagttccgaagtttgcgtcatacacaagagagggtattatagagctgataa cggttgtgagatctgagaggggagggctgagtggattgactaccatggacatagtcaatgctgccttacaggtagctagc agacctagctttgaacgcagattcaagccacagatggcagatgtagttcagtcaggaaagaaacctttgttacccacgcc aaccaatgcaaggaagcctctactacctctacctccttacccatcaaatactgccatgacatgctacaatcagatggatg atgaggacatttgtgtaatatgtcatgatggacttagtacagaagccactaaagtgctagagtgtggacatgtgtttcat aatgggtgcatcaaggaatgggtgctgggacgtgaaatgacgtgtcctacttgccgtcgacatgttctgtttccggagga ttttccaaaacttgggaagtaa |
|
Protein
| Protein ID | pfu_aug2.0_648.1_27628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_648.1_27628.t1 MNFVRPPVPAPPTMPVQHPMPSQASMGYAPGVGMFYPGQPLAGPPLSYKQDCINPQLSHAGAGYQAGSMYRPQYPAINPT MPAYGYLPQQAYNPTPLQPAAEAFPGKPLYTTGDSTYWSVTPPPSLSSFSTAKTDVANPPVASPPVASPPVASCVTSPVA NPIVSPVYGSGIPSVSPSRPASPSFSSFQSPPPSLSPSTRALAALISENLKRQLVSPYRPKSPISDSTNVLSRSPGHLTY PATPPSDAKVMQATTVSTVTAGTSAPFVSYVMPVSSASTKMPTSSSQKGFTVKETFESKASQHGISINKTENELAERRPK GNLSKVPLDSRATEEALNKFRAELFETKAMSCGIRVVDPNEKTKSDKPSSGMSKSQDDNMSDDTPVLSLQESLGSMSDYV RENDEELGIRGNNLMRLLARTRSLSESSLGSYFSDIDFEPTGIEGNEKQSALEEMIEKLVAKAISEAVSEVLFENQCKLD VKSDEKEICEENNKGIEKYKEEDEECGKVEKIAKENEKGNEKGNETKSESEVTKENEINKLECDVTSEGEHKKDEENVVK DDCCKKDEKCVKKDETVSERLTFKTEKDLKDDASSIDLNPRSPVFKPRKVKEWAQEPKIESDLNPSVPEFTPLSFSLSQH SDLSLSGSDPGYMYNEDYSSYSGSRYPRTIESHMDMYLSHNRRTYPKNRSIQTDSAILIDTASNTRQVKLKDQGMDTKSC DKRDVCINTMESYEIEEDDRVINIYEKKDQETMTTKKKTKSKVTMVTDEDPDLESVPSPRKAYEIGLREKLLKTQGELLR LRGKVCLDELHKQIHQLEKNKNRWEDQFSSLYQFRPLASVIDTQISKLKVDGKLKSCEDQLEAGEMLIPDVPCFAVSLPI GPTEVHVVNRERMPRIHSSNEDQSTHANPFVSTSPKHSVINSAGYTELSVSETSNINDVYVKQGHDLLSGRGKANNLLKE DANTSMGFEPSVDRIDLASTGDMKVKPSDVGGTFDQPVSIKPAPCLDLTKPALSASLQHVPETKFTSIPQQQTSLLSLDK FDEDSDELQPHLQSPKVDAVSTDFDYIPTNTGVLDSSSIASRGGWSSISDVKRDIDFNEHSQETNMSSNYTDSASNVELD LNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKEQEQDVKDSAIEEESLSVI SDNLTESKEGAVNIPLSKDKTSSMSEQNQLPLSSLGATVETAVPTQPSQAAVDPKLFESVLNELMKAYPHLTANPLVLQS IAMQQTLVLQEFISRNSGQVLPNLAGSSNDLTLQPSTSNLNLGSVRENSPNESVDTVESGASKAPPGFTEKVDEIPDQDL NADIASESALLESLMAKSPDKKKKLISIPLPCNPLGIPSVNTSPTKSATGSINGDQAGTSKLPYNLSMSNYVHVTAGVQD GSPEKDRGIPAIDTVVEGTRQNSILSKNTDELSKEVDWNDNNLEVKKSEPQLSSANEQSKTLNKAPNTDYTVSDRKDNPY AQISKPLNESAWKQTTNNYSSSNSNQVLNQWSNAENIAPKSNKVASAAIVNGDQMSGKVKQSTKTSQSKALDTGKDQGDW WGTESDHMESHGDHVTNTKSHDYDDHVTSTKSHNLTEFGSQGVSGSKVKDWLEGVSTFVEEPAPKMPNAWLNREKVKAID PFTPKWMRSPEAKPPKKSQLDPFAPKWMESEAALGTIGGLETIPPVPDTAAAPVVSQKEKEEVKDDVEEMKEETEDWTQV TKKGKKQKPDTPPPPPAPVVKQKKLVQMVTNKAVKEQRSNNFERLIAKLQEVPKFASYTREGIIELITVVRSERGGLSGL TTMDIVNAALQVASRPSFERRFKPQMADVVQSGKKPLLPTPTNIRKPLLPLPPYPSNTAMTCYNQVTKKGKKQKSDTPPP PPAPVVKQKKLVQMVTNKAVKEQRSNNFERLIAKLQEVPKFASYTREGIIELITVVRSERGGLSGLTTMDIVNAALQVAS RPSFERRFKPQMADVVQSGKKPLLPTPTNARKPLLPLPPYPSNTAMTCYNQMDDEDICVICHDGLSTEATKVLECGHVFH NGCIKEWVLGREMTCPTCRRHVLFPEDFPKLGK |
|