Gene
Gene Model ID | pfu_aug2.0_648.1_27629 |
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Locus | scaffold648.1 : 126866 ... 136374 : + |
To GenomeBrowser | scaffold648.1:126866..136374 |
Genes list of scaffold | scaffold648.1 |
Synonym | pfu_aug1.0_59807.1_70898 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_648.1_27629.t1 | 3 | 1 | Troponin | 8 | 47 | 5.4e-11 | 42.6 | 0.3 | 4500.0 | -2.4 |
pfu_aug2.0_648.1_27629.t1 | 3 | 2 | Troponin | 41 | 126 | 5.4e-11 | 42.6 | 1.0 | 15000.0 | -5.4 |
pfu_aug2.0_648.1_27629.t1 | 3 | 3 | Troponin | 149 | 236 | 5.4e-11 | 42.6 | 3.6e-15 | 5.4e-11 | 42.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_648.1_27629.t1 | gi|675851374|ref|XP_009011247.1| | hypothetical protein HELRODRAFT_185295 [Helobdella robusta] | 0.0 |
pfu_aug2.0_648.1_27629.t1 | gi|675878874|ref|XP_009024997.1| | hypothetical protein HELRODRAFT_178654 [Helobdella robusta] | 3.9937e-43 |
pfu_aug2.0_648.1_27629.t1 | gi|675852882|ref|XP_009012001.1| | hypothetical protein HELRODRAFT_109499 [Helobdella robusta] | 3.00004e-41 |
pfu_aug2.0_648.1_27629.t1 | gi|157128848|ref|XP_001655223.1| | AAEL002417-PC [Aedes aegypti] | 3.0e-37 |
pfu_aug2.0_648.1_27629.t1 | gi|386764359|ref|NP_001245652.1| | upheld, isoform M [Drosophila melanogaster] | 1.0e-36 |
Transcript
Transcript ID | pfu_aug2.0_648.1_27629.t1 |
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Definition | - |
>pfu_aug2.0_648.1_27629.t1 atgtcggacgacgaatcacacgcaatggaggaaaccgaggcgggcgacgaatcagaagccaagagagccatggaggatgc taaaaagcgaaaggaagaacgagtagcacaagaaatagcagaatttgaagaacagagaaaagaggagcgggagaaagaac aagctgaaattcaggctcttagagaaaagagggagcaaagaaaacgcgagagagcggaggaggaacaaagaatggcagag agcagagcccaggaggaggcaaggagaaaagccgaggaggaagaacgaaagaggaagaaggctgaagaagaaaggaagag aaaagaagaaagggagagaaaacgccgtgaacaagaagaaatgataaaaaacatgcgaaaaccaaactttgttatctcaa aacgcgaaggagatcccaaaggtggaggggccgaagatggagagaaggaagtacagaagtccaaagagcagctggaggcc gagaagagggccatactggcccaaagaattaagccactgaccactgacggactggacactgccaagctggtggaaatggc caaagagcttcatcagaacatattcagactaatgaatgaaaagtacgacatggaggagaaattcaaacgtcagcaatatg atatgatagagttggcagagagagccagacaaatgaacaaaggaaaatccaggcgaggtgaagctagagttgatgaatca ttcgacagactggctgataaattcgctggtgccccaccaaaaattcagttatgcagtaaatacgaaagacatacagatca ccggtcatatgaccaaagaaaagatttatatgaagaattaagtaaacctatagaaccgccaaaaatagggcgtcgacaag acgaggagggtgaagcagccgaagccgaagagggaggggaagaatag |
Protein
Protein ID | pfu_aug2.0_648.1_27629.t1 |
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Definition | - |
>pfu_aug2.0_648.1_27629.t1 MSDDESHAMEETEAGDESEAKRAMEDAKKRKEERVAQEIAEFEEQRKEEREKEQAEIQALREKREQRKRERAEEEQRMAE SRAQEEARRKAEEEERKRKKAEEERKRKEERERKRREQEEMIKNMRKPNFVISKREGDPKGGGAEDGEKEVQKSKEQLEA EKRAILAQRIKPLTTDGLDTAKLVEMAKELHQNIFRLMNEKYDMEEKFKRQQYDMIELAERARQMNKGKSRRGEARVDES FDRLADKFAGAPPKIQLCSKYERHTDHRSYDQRKDLYEELSKPIEPPKIGRRQDEEGEAAEAEEGGEE |