Gene
| Gene Model ID | pfu_aug2.0_648.1_27631 |
|---|---|
| Locus | scaffold648.1 : 185828 ... 202792 : + |
| To GenomeBrowser | scaffold648.1:185828..202792 |
| Genes list of scaffold | scaffold648.1 |
| Synonym | pfu_aug1.0_3614.1_01489 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_648.1_27631.t1 | 1 | 1 | Bromodomain | 105 | 184 | 1.7e-24 | 85.5 | 5.7e-28 | 4.2e-24 | 84.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_648.1_27631.t1 | gi|532111875|ref|XP_005340628.1| | PREDICTED: cat eye syndrome critical region protein 2 [Ictidomys tridecemlineatus] | 2.0e-38 |
| pfu_aug2.0_648.1_27631.t1 | gi|554840018|ref|XP_005930445.1| | PREDICTED: cat eye syndrome critical region protein 2-like [Haplochromis burtoni] | 4.0e-38 |
| pfu_aug2.0_648.1_27631.t1 | gi|548383178|ref|XP_005734824.1| | PREDICTED: cat eye syndrome critical region protein 2-like [Pundamilia nyererei] | 7.0e-38 |
| pfu_aug2.0_648.1_27631.t1 | gi|499035224|ref|XP_004568287.1| | PREDICTED: cat eye syndrome critical region protein 2 [Maylandia zebra] | 7.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_648.1_27631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_648.1_27631.t1 atggcacccaggaggatatcagctcgtattgagagaaagaaacgagaacagttagagcaggtcagggttcaaataattag atatacttctgtgatcagatgtacaaaactaagaacatacatggaaaacggggagcaaaagagagccaaacgtctagccc tgagggaacagagagctcagcttatagcggagggtaaagaaataccaccagaactgatgtacgtagccaatcctagcaac agcaaatatgttgacacggaggataataaagcaccatttgagctagatgaagagactgtggaggccatgcataatgtgtt agagtccattaaagctcatcgtgacgcctggccgtttatggaacctgtcagtaaggaggatgctccagattattacgata tcatcaagaaacccatggacctgagtacaatggaggataagctgaccaatagagagtacagaaataagaggaagtttatc agtgattttaacctgatgctggataactgtagagtctataatggaatggataatgattttacaacaatggcacagagact gcaaaaggctttctacagacaagttcaggtgcacctagataagttacagacaggttatgaagctgatggcgacttcaggg tgggacgatccattgagagctgtgaaaaacgttaccgacctaaacgtgcagcaagttccagggccatggacacattacat agggcaatggatgatgctgaatttgaggatatgacgaggagtagcgatgaagaggacagtgacagtcgaagccagagtcc taaaatcatcatgtatccacgtggaaagatccagacgttacaaaacagacttataccggagttatctccccagcaaaagc ttggccagatggtcaaagatcaaatatctcaacatctcaacgagaagaaaaagaagttagagtggaatccagaaagaggc acgatacagattactaatggacaagaaaaatttgcaccttatacgatcaaggggcaggtaactccagatggcaagaaact gacattacaaacagctcaggtgataaggcacaacggaaaaacgatagtgtactcctacggcaagcctaagaccacaagtt acagcaagtcccaagatggaagtcaagctcctgctaacagccaggagaatgcactaccaagcacaggccaaatattagcc cagcatcagcaaagtggaggcactgtcaaactgaccccctccatgacgtcccagcttcaagggaagcaatttacagtaca gacaaacctgggaccaaggataataaaaatagcagaacccgtaacttctgttaatctgtctgtatcgtcccctgctgcac agacggcacctgctgcacagtcgacacctgctatacagacactgcagactgccactacaggccaagtggtacaatcccct gggcagagcccaactcagactgtaaggatcagtggaatgctgggtaataaatcaatcacagtggtagatggtatgctgtg tgtagacggcaagaagattaacgtaccagtggcaggaaaagccagaattcttatcaagggtggtggtacagggtcagtac ctacaagtcccagcgtaaggatcatcgccaaagcacctcaacaaccaagcccgagtcaagctagtccaaggccaactcag gtcacacccagtaaccaagcaaccattcagttaccacaaagtcaaggtcaaaacttaccacaagcttcaaaaagtgtgtt atcctctgtgaaagacaagattgtggctcaatatggacaaaatcaagccgcccaagttcaaggacagattgtgaaccctg tgtcgacgatttctgtgcaaggtcagagttcgcctgtgggtctaggtcaggtcactattccagccctgaagatagcaggg aatgctaactccagaggaattgtcaacattccagccattaacagacctggatcggcaatcagaatgataggagtggcaga acagccagttacaaaaggtgtacagaaaacgagactgctaccagagttgtctccctcatctggtcttagtggctatatgc cgtcaaatgtatctgataacaaagctaacgattcctccactccgcaaaacgtttcagcattacttcctacaactgtgtta aatataaacaagtttatgggcgatgaagtgtgcatgcagcctggacttagtgcgaacagtgtactacaaacaggtggtaa tacgacggtaataaccggctctcaaacggctgtcatgtcaaacactatgggcaataatatgatacagacacaggctgtct catcaaaccaagcaagagggcaaactgaacaatcagccatgagctccagtcctctaaagaggagagcacctgatcaacaa gcaggaggtacacctcccaaacaattaagttctccgtcgacaagtaatttggacttaagtgttgtttctggtcacctgac tgatactcagaaagcaaatttaatacgtttgttaaaagccaagcatatgcttgctactggttctcaacccgaccaatccc aaggtagttctgaggttccgtctgagggagaagtgctatcaaacgtaaatcagaacactatgagtgctgtgttagaccag cagccctccatgatacaaaccacagggcaagcagggtctctcaaccaaaatgacgtacaaaatcagcatttacttatcca agaaaacctttttgataagttacaaaccattttcaattcatctagttcttctgttgtgaattcaaactcgtgtgtatcaa ctgtgtcgcagccaatgcaatttgtgagcaccgagggaacatctcaagatgatcctccacctgtgttacaaccagaagta aaggggttgtctccaaagtataaagataaagtgtcattgtttacagccaatttacaaagtacctctttagccagcaaact gcaagtcttgtccaaatcaccaaccaaaactacaaacagtcccatccagtatgtatccactagccctgataatactagca gagccattgttattggccaattgtcaccgagcttacaaaaccatcttcagcaaatgcaagctgcccaacaagccaatcaa agcttacaagacatgagtcaaaccttggctggacaaaccattccagttcaggggaaaaaagtggtattgcattgcttcca ttaa |
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Protein
| Protein ID | pfu_aug2.0_648.1_27631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_648.1_27631.t1 MAPRRISARIERKKREQLEQVRVQIIRYTSVIRCTKLRTYMENGEQKRAKRLALREQRAQLIAEGKEIPPELMYVANPSN SKYVDTEDNKAPFELDEETVEAMHNVLESIKAHRDAWPFMEPVSKEDAPDYYDIIKKPMDLSTMEDKLTNREYRNKRKFI SDFNLMLDNCRVYNGMDNDFTTMAQRLQKAFYRQVQVHLDKLQTGYEADGDFRVGRSIESCEKRYRPKRAASSRAMDTLH RAMDDAEFEDMTRSSDEEDSDSRSQSPKIIMYPRGKIQTLQNRLIPELSPQQKLGQMVKDQISQHLNEKKKKLEWNPERG TIQITNGQEKFAPYTIKGQVTPDGKKLTLQTAQVIRHNGKTIVYSYGKPKTTSYSKSQDGSQAPANSQENALPSTGQILA QHQQSGGTVKLTPSMTSQLQGKQFTVQTNLGPRIIKIAEPVTSVNLSVSSPAAQTAPAAQSTPAIQTLQTATTGQVVQSP GQSPTQTVRISGMLGNKSITVVDGMLCVDGKKINVPVAGKARILIKGGGTGSVPTSPSVRIIAKAPQQPSPSQASPRPTQ VTPSNQATIQLPQSQGQNLPQASKSVLSSVKDKIVAQYGQNQAAQVQGQIVNPVSTISVQGQSSPVGLGQVTIPALKIAG NANSRGIVNIPAINRPGSAIRMIGVAEQPVTKGVQKTRLLPELSPSSGLSGYMPSNVSDNKANDSSTPQNVSALLPTTVL NINKFMGDEVCMQPGLSANSVLQTGGNTTVITGSQTAVMSNTMGNNMIQTQAVSSNQARGQTEQSAMSSSPLKRRAPDQQ AGGTPPKQLSSPSTSNLDLSVVSGHLTDTQKANLIRLLKAKHMLATGSQPDQSQGSSEVPSEGEVLSNVNQNTMSAVLDQ QPSMIQTTGQAGSLNQNDVQNQHLLIQENLFDKLQTIFNSSSSSVVNSNSCVSTVSQPMQFVSTEGTSQDDPPPVLQPEV KGLSPKYKDKVSLFTANLQSTSLASKLQVLSKSPTKTTNSPIQYVSTSPDNTSRAIVIGQLSPSLQNHLQQMQAAQQANQ SLQDMSQTLAGQTIPVQGKKVVLHCFH |
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