Gene
| Gene Model ID | pfu_aug2.0_652.1_07757 |
|---|---|
| Locus | scaffold652.1 : 1 ... 14605 : + |
| To GenomeBrowser | scaffold652.1:1..14605 |
| Genes list of scaffold | scaffold652.1 |
| Synonym | pfu_aug1.0_49820.1_48710 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_652.1_07757.t1 | 2 | 1 | Clathrin_H_link | 165 | 181 | 1.3e-16 | 60.2 | 0.58 | 8600.0 | -3.3 |
| pfu_aug2.0_652.1_07757.t1 | 2 | 2 | Clathrin_H_link | 683 | 728 | 1.3e-16 | 60.2 | 2.9e-20 | 4.4e-16 | 58.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_652.1_07757.t1 | gi|524899196|ref|XP_005106036.1| | PREDICTED: clathrin heavy chain linker domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_652.1_07757.t1 | gi|676431539|ref|XP_009046285.1| | hypothetical protein LOTGIDRAFT_93131, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_652.1_07757.t1 | gi|585648175|ref|XP_002732905.2| | PREDICTED: clathrin heavy chain linker domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_652.1_07757.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07757.t1 ggagtctcagtcaaaatggtttgggaagagaggcctgaattggcacataactgtcgggacattcagagatacagatgacg aaattgcttcccacaccattgttcacatatttgacaatgcaccacaggatgccaaaacttcaaatgcagtccttgaaaat accttggctctatttcatgagaaatgcccagatgtcacttgcgcttatttaagatcagataatgcaggctgctttcatgg atatgcctccatttatggtatcttgtcaatcaacatcaacagctcaatccaggtaaaaagaatggatttttcagatccac aaggtgggaagtcaatatgcgatcgccgagcagcgcatataaagtctgcaatccggaaatttgttaatgaaggaaatgat gtgaagtccgcaagagaattccttacagctgtcaaggaaagtagagttggacggatcacaattgtacatgcaaaccctcc cactcaagcagctgtagacgtaaacgagggaaaactgaaaaacatcatgaccttgaacaactttctgtacagtgatggat accttcatgtttggaggcagtatgatattggaaagggacaatcatacaaattactttcaaagccaccactacaatcaata acaattattgaatcagcagacggtatgagacgaagtcctacatcaaaatctgctcatcaaagaagctcctccaaagtgat aactttcagagataaagcggaaaatccagaacatgcagaagttgaagatcaacccgcaggacagacagaaactccaacac atgatgatcaaaatgtaactcaaatagaaaatcaagaacacgtcaatcagtctgttgacagtctgaatggattatttgta tgctcagaggtccagtgtaggtgcacattcacaaagtacggaaatcttatgcgacacttagatattggcaaccataacaa ttcaaaattgtctaagagtctgagtgacaggtccaaaattttatataaccatagcatacaagagaagaatgttcatcttc ctcattcaaatgctgaaactgtggaatccacctcaagtagtctacagaaaggatgggcccttaaagggaaacgagaggtg aagaggtttaccgtggcacagaaagaattcttgacatccaaatttgacataggtgaaacatctggacaaaatcgagcctc caccccagggggattcccaaagatccctcccatcataaccagcgagttagatagagcattcctcgttcatgttaacgaat acatagaggaggaactgaggaaggtggactctagggatcccgaacaaagatacattatctatagaaatgtgtttaataag attatagagcatgtttctgcctataaacctttgctgacctccatcaagaaggagtatgaagacaccatagaggccataca gaaaggtcagagagaggcagcattatcagttattgataaagacaatgacagattaaccaaacagctcgaggaactaaaac aaaaacgtagaaatcatgaagaacaagaaagagaggagcaagctccacctaaacgagaacttaaaaaagatagacgctta attccagggcttacattagaagaggccacagacttgaaccttctatataaaaacctggatgtcctagacagacagttaaa agaactcaacataagtttacgtacacggtatctgccaaagtcacagaaggtggacctcaaggacaaactggacaacaagg tcgattatcgcgaccagcttgtcagacaaggacagctctacagagctaaacgatatcgtctgaagatagcggtagaggct gcccaggcttataacagagtaaaaccaccacatcaaacagtgggtgatgctgtgacgtttgctttggctcaggcttctgg catgcaagtccaggaaaaagaaccaggacaagaacaaggtcagcaggatggtcagcagagggagggatccccatctggac ctcacacaaccacatcatttgacgatgatgatccgaacaaggagaaagaggccgagatgatgttagagtacatagagaaa ttcaacgaattgtttgaagatgggaaatatgaagatgccgctattcacgctgctaacagtccgaagggaatcttacgtac ttctgctactctggccaaattcagaggtaggatattttatagttcatcaaaaggaaaaaaatgtctaatttcgttgtata cagcttcatggacttggatttacgtacctggatttttatag |
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Protein
| Protein ID | pfu_aug2.0_652.1_07757.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07757.t1 ESQSKWFGKRGLNWHITVGTFRDTDDEIASHTIVHIFDNAPQDAKTSNAVLENTLALFHEKCPDVTCAYLRSDNAGCFHG YASIYGILSININSSIQVKRMDFSDPQGGKSICDRRAAHIKSAIRKFVNEGNDVKSAREFLTAVKESRVGRITIVHANPP TQAAVDVNEGKLKNIMTLNNFLYSDGYLHVWRQYDIGKGQSYKLLSKPPLQSITIIESADGMRRSPTSKSAHQRSSSKVI TFRDKAENPEHAEVEDQPAGQTETPTHDDQNVTQIENQEHVNQSVDSLNGLFVCSEVQCRCTFTKYGNLMRHLDIGNHNN SKLSKSLSDRSKILYNHSIQEKNVHLPHSNAETVESTSSSLQKGWALKGKREVKRFTVAQKEFLTSKFDIGETSGQNRAS TPGGFPKIPPIITSELDRAFLVHVNEYIEEELRKVDSRDPEQRYIIYRNVFNKIIEHVSAYKPLLTSIKKEYEDTIEAIQ KGQREAALSVIDKDNDRLTKQLEELKQKRRNHEEQEREEQAPPKRELKKDRRLIPGLTLEEATDLNLLYKNLDVLDRQLK ELNISLRTRYLPKSQKVDLKDKLDNKVDYRDQLVRQGQLYRAKRYRLKIAVEAAQAYNRVKPPHQTVGDAVTFALAQASG MQVQEKEPGQEQGQQDGQQREGSPSGPHTTTSFDDDDPNKEKEAEMMLEYIEKFNELFEDGKYEDAAIHAANSPKGILRT SATLAKFRGRIFYSSSKGKKCLISLYTASWTWIYVPGFL |
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