Gene
| Gene Model ID | pfu_aug2.0_652.1_07759 |
|---|---|
| Locus | scaffold652.1 : 22224 ... 31575 : - |
| To GenomeBrowser | scaffold652.1:22224..31575 |
| Genes list of scaffold | scaffold652.1 |
| Synonym | pfu_aug1.0_12319.1_25017 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related c3 botulinum toxin substrate 1 | GO:0005488 GO:0016043 GO:0044763 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_652.1_07759.t1 | 1 | 1 | Ras | 14 | 196 | 7.4e-34 | 116.4 | 5.5e-37 | 1.4e-33 | 115.6 |
| pfu_aug2.0_652.1_07759.t1 | 1 | 1 | Miro | 14 | 140 | 3.1e-11 | 43.8 | 2.3e-14 | 5.8e-11 | 42.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_652.1_07759.t1 | gi|673047223|ref|XP_008877572.1| | hypothetical protein H310_12329 [Aphanomyces invadans] | 0.0 |
| pfu_aug2.0_652.1_07759.t1 | gi|698816000|ref|XP_009841029.1| | hypothetical protein H257_14826 [Aphanomyces astaci] | 0.0 |
| pfu_aug2.0_652.1_07759.t1 | gi|488510611|ref|XP_004447391.1| | PREDICTED: rho-related GTP-binding protein RhoQ [Dasypus novemcinctus] | 0.0 |
| pfu_aug2.0_652.1_07759.t1 | gi|751775103|ref|XP_011214196.1| | PREDICTED: ras-related C3 botulinum toxin substrate 1 [Bactrocera dorsalis] | 1.4013e-45 |
| pfu_aug2.0_652.1_07759.t1 | gi|524954699|ref|XP_005077328.1| | PREDICTED: rho-related GTP-binding protein RhoQ [Mesocricetus auratus] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_652.1_07759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07759.t1 atgagcgatgattcgggcgatgacaagccgagaaagatcaaagttacggcggtgggggacagcggagtgggcaagacgtg catgctgatgacgtacgtcaacaaccagtaccccaaggaggggagggtaccgtcactgtatgagaacaacaccgtcaaag ccggaagaagtgaatcgtttgaagtaccgattaacatagaagtggacagtgtcagctatgtactaggattaactgacacg ataggcgaggacgagtatagacgtttacgagaactattcactgcgggaacggaagtgtttctcgtctgcttcagtgtaac ggaaccagatacattagaaaatgtaaagaagaactggctcacggaaatcaaaattctgtctcccaaaggaaaatttattc ttgtcggaacaaaaatcgataggagggacgatcaagatattctgaaacagttaaaagaacaaaacaaaaaagtcataaca acgctagatggtgtgaaaatagcaaattctgttggtgccaaggcttatgtagagtgttcggctatagagcaaataggact taaacaagtgttcgaaactgttgtcatggttgcaaccggaaatgctgaaggccccaaaaaaccaaacggttcaaaacctc aatgttccgtctcatga |
|
Protein
| Protein ID | pfu_aug2.0_652.1_07759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07759.t1 MSDDSGDDKPRKIKVTAVGDSGVGKTCMLMTYVNNQYPKEGRVPSLYENNTVKAGRSESFEVPINIEVDSVSYVLGLTDT IGEDEYRRLRELFTAGTEVFLVCFSVTEPDTLENVKKNWLTEIKILSPKGKFILVGTKIDRRDDQDILKQLKEQNKKVIT TLDGVKIANSVGAKAYVECSAIEQIGLKQVFETVVMVATGNAEGPKKPNGSKPQCSVS |
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