Gene
| Gene Model ID | pfu_aug2.0_652.1_07760 |
|---|---|
| Locus | scaffold652.1 : 39064 ... 42755 : - |
| To GenomeBrowser | scaffold652.1:39064..42755 |
| Genes list of scaffold | scaffold652.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_652.1_07760.t1 | 1 | 1 | Globin | 46 | 128 | 1.1e-10 | 41.8 | 2.2e-14 | 1.7e-10 | 41.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_652.1_07760.t1 | gi|291226786|ref|XP_002733371.1| | PREDICTED: extracellular globin-E1-like [Saccoglossus kowalevskii] | 6.0e-18 |
| pfu_aug2.0_652.1_07760.t1 | gi|391327892|ref|XP_003738429.1| | PREDICTED: neuroglobin-like [Metaseiulus occidentalis] | 3.0e-15 |
| pfu_aug2.0_652.1_07760.t1 | gi|260830134|ref|XP_002610016.1| | hypothetical protein BRAFLDRAFT_99970 [Branchiostoma floridae] | 4.0e-15 |
| pfu_aug2.0_652.1_07760.t1 | gi|665814671|ref|XP_008555957.1| | PREDICTED: neuroglobin-like [Microplitis demolitor] | 2.0e-14 |
| pfu_aug2.0_652.1_07760.t1 | gi|524871076|ref|XP_005092314.1| | PREDICTED: globin-1 subunit beta-like isoform X1 [Aplysia californica] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_652.1_07760.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07760.t1 atggggactattaaatctaaattcaaacggacaaagagtggtagaagggccaagcccgtgaagctaccggagtccagttc ggccagaaagacggtggacccacgactacccttcaacaattaccgtcagattttcagcatacgtaatgcgtggaagacgg tggcacggtccttggaggacacggcaaaggaccacttgatcaggtttttggccaagtgtccaaactacaaggaatcattc tcagggatcggaaacctcaacacggaagaagagatgagggagagtctagaattcgaaacccacgcagttaatttattcgg attatttgatgacgtcatatcaaacttagaaaacgtagacgcagcactgagcgatatccatgatgcggctcaatcttcac tgatgtcagaggcactcgttaaggacatggaggaaacgttctatgagaccttacgaacagtactggatgacagatttaca gacgccctcaaagaaaattatacacttttatatagttttataaagacagaaatacaaaaggcatgtggagcaacgggcta g |
|
Protein
| Protein ID | pfu_aug2.0_652.1_07760.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07760.t1 MGTIKSKFKRTKSGRRAKPVKLPESSSARKTVDPRLPFNNYRQIFSIRNAWKTVARSLEDTAKDHLIRFLAKCPNYKESF SGIGNLNTEEEMRESLEFETHAVNLFGLFDDVISNLENVDAALSDIHDAAQSSLMSEALVKDMEETFYETLRTVLDDRFT DALKENYTLLYSFIKTEIQKACGATG |
|