Gene
| Gene Model ID | pfu_aug2.0_652.1_07766 |
|---|---|
| Locus | scaffold652.1 : 126578 ... 138740 : + |
| To GenomeBrowser | scaffold652.1:126578..138740 |
| Genes list of scaffold | scaffold652.1 |
| Synonym | pfu_aug1.0_61026.1_12947 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_652.1_07766.t1 | 2 | 1 | CUB | 7 | 105 | 3.3e-10 | 40.0 | 1.8e-09 | 9.0e-06 | 25.7 |
| pfu_aug2.0_652.1_07766.t1 | 2 | 2 | CUB | 115 | 157 | 3.3e-10 | 40.0 | 4.3e-05 | 0.21 | 11.6 |
| pfu_aug2.0_652.1_07766.t1 | 1 | 1 | VWA | 173 | 341 | 6.0e-17 | 61.9 | 2.3e-20 | 1.2e-16 | 61.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_652.1_07766.t1 | gi|524893177|ref|XP_005103108.1| | PREDICTED: matrilin-2-like [Aplysia californica] | 8.0e-16 |
| pfu_aug2.0_652.1_07766.t1 | gi|675879889|ref|XP_009025465.1| | hypothetical protein HELRODRAFT_189175 [Helobdella robusta] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_652.1_07766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07766.t1 atggattcttcaccttatgctgtaagttcaccgggatacggaaattctgactacctcagtggtacggattgttcctggat tataacaacagtccctgaagatgtcatattgtatagcctatttataaacgatacagattgtcagggggatagtatagaaa tattctatggtccaggaagaatctttgtcgagaatactgggtccacatgcggaaagaacctaacatttggaccattttcc gataacccggatgatgttatgacagtcgtgttccgatcatctgatacgagtaaaggaggtgccggattcatcatccacat gctttctgtcccaagatacaaacaaagctcaaccattcggagattctgtgagagtaatgattttgttgtaaaacgtttta aagcctcagaattttctctaacctttcattctgatgactctgtgcagcagaaaggattcatcgtccggtatagattagac aatgcaaccaaagaagattgctcaaacacaacagcagacataatattcatggtagacacgaccgaggataccaaagtgag tggctttaatcaccaacttatgatagttcaagatgtaatttctgcatacgacgtcagcaaaaatggagtacgattcggca ctgttatatatgaagatggaccattcaatttgtattggctggacgaacatagtaacacagcttatttgttgaacttgacg tccgcgatgccctacgtggaaggatacgacagagacgtccacggtacattggagtttgtccggaatgaaagtttttgtac ttgccacggtgctagggagagttcggttaagttgatagtaatatttatgttcggagagtctgacgattatgagaaaacca ctaaaatcacaaaatctcttcataatgagggtgtacatatcatcagtataggtatcggtagtacagtaaatgctacagaa atggaagcagttgcaagcgaaataaaaaatgttttcttctttgaaaatgtagaagacctcgctgatttttcatatgtgtt atcagcgagaatatgtgaagtccttgccagcaaaagtaaaaatttcccaaccagtacatatgtcttaaattcaaatttag agacaagctcaataattcaatcgtcggaggtacaaaagtcatctcaaaccagacatcatacgattgcaccaacctctgta tctcaatctatactcttcactcaatttgacacgataagctatagtaaaagttcgttaagtacgtctttggatgggtcggt atcatcaacgtatgccattgacataattagcgaatcaaaatcgtcagcggggaccacatcaactcatataagtgaagtca atacgatatcaatatcaaccagtgtaccggatatgacatatttgaaaagttccacaagaggaataactccatctataact tcttcctccagtttgtcgttcgcttccagcatgcttgttacatcagtagaaatttcatcatctagttcttatacagacac agtgacttcaccaagtacattaataatgagtttatcaggacaaacagacggagacaataacacagctccatag |
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Protein
| Protein ID | pfu_aug2.0_652.1_07766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_652.1_07766.t1 MDSSPYAVSSPGYGNSDYLSGTDCSWIITTVPEDVILYSLFINDTDCQGDSIEIFYGPGRIFVENTGSTCGKNLTFGPFS DNPDDVMTVVFRSSDTSKGGAGFIIHMLSVPRYKQSSTIRRFCESNDFVVKRFKASEFSLTFHSDDSVQQKGFIVRYRLD NATKEDCSNTTADIIFMVDTTEDTKVSGFNHQLMIVQDVISAYDVSKNGVRFGTVIYEDGPFNLYWLDEHSNTAYLLNLT SAMPYVEGYDRDVHGTLEFVRNESFCTCHGARESSVKLIVIFMFGESDDYEKTTKITKSLHNEGVHIISIGIGSTVNATE MEAVASEIKNVFFFENVEDLADFSYVLSARICEVLASKSKNFPTSTYVLNSNLETSSIIQSSEVQKSSQTRHHTIAPTSV SQSILFTQFDTISYSKSSLSTSLDGSVSSTYAIDIISESKSSAGTTSTHISEVNTISISTSVPDMTYLKSSTRGITPSIT SSSSLSFASSMLVTSVEISSSSSYTDTVTSPSTLIMSLSGQTDGDNNTAP |
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