Gene
| Gene Model ID | pfu_aug2.0_653.1_11035 |
|---|---|
| Locus | scaffold653.1 : 23886 ... 29190 : + |
| To GenomeBrowser | scaffold653.1:23886..29190 |
| Genes list of scaffold | scaffold653.1 |
| Synonym | pfu_aug1.0_7338.1_09538 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_653.1_11035.t1 | 1 | 1 | TatD_DNase | 928 | 1134 | 8.0e-17 | 61.2 | 1.2e-20 | 1.9e-16 | 60.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_653.1_11035.t1 | gi|221052927|ref|XP_002257838.1| | Liver stage antigen 3 precursor [Plasmodium knowlesi strain H] | 2.0e-13 |
| pfu_aug2.0_653.1_11035.t1 | gi|301613602|ref|XP_002936300.1| | PREDICTED: putative deoxyribonuclease TATDN2 [Xenopus (Silurana) tropicalis] | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_653.1_11035.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11035.t1 atgttttcgtgctttcagaacactacttggcgaagacatcctacctctaccaatacatcttctctgtatcacgatagatc agattcccgacaagctcctgcatcaaaaatgaggaagacatgtccagcttctctaccagaaaaggatgcaatccatggca attttgagaacaagaaaaagaaacatgtacacttctcatctgtaatgagccttacgtatggacttaatggaggtagacca agagcatgtagagatcccctgtcatttcttacatttgatgacaatatgtcgttaacaacgtacttacctgacaaaacttc gataagaagaactttgtacgattcgcactggcatggaaacaaccaacacgttcaagcggagcattactccacgatttcta tgtttgtagcaaatgaatcagatgagccttcagcagcaataattgataaatcctcgggatatcagagcaagaaaaataga gaggtctttgaacttatgaattatatttctactatggaggatctgcgaggctctggacgaaatgtatcattgacggataa agaagcaagtgctcctgaaaatcatacagaatctactgttgaaaaaaatgaggaaaatttacctcagacatatgtagact ctcagtttggtacgtgtgcaaagctgaaacattcatgtgagaataatgaagaactaatcaatcagactcatggtaaacca acctttaaaaatcttgagaatggtgaagaatattccgatgataatcttgcagaaacaccgatggagtttgatgcacaacc tatattcgaaaatcaagtaaaatcccacggtggccttgctctagagaaagatgaagaaaatagtttgaagaattccatag atgatgactctgaaaagccaagagaatctactgttgagaatccaaatgaatttgtgcttgaaaatcgttcagattctaca gttataaatagtttagaaacctattttgaggattgtacagaacctgttctagagaaatgttcagaacccacagatgtagc tcaaacagagccagtacgtgaaaatctaaaattctctgtgattgagaactgtaccgaaccggttcttgagaaacattcag aacatacagttgtagcccttactgagccacttctagagaatctgatatcctattcacatgagaattttgaagaacctgat ttggagaatggttcagaacctacagttgtagcccattcagagcctgttcttgggtatgaaagaccttctgcacgaaagat ttgtataaaacccattcatgaaaatcgttcaaaatctacagatgtagcgtttacaggacccgctcttgagaattgtccag aatctgcagttgtagtccatacagagcctgctcttcgaaatgaaagaccttctgcatgtgggaaaagtacagaatccgtt cttaaggaccatacaaaacctacagttttagcacatactgagcctgttggtgagaatctaagattcaccgcttctgaaaa ttgtacaggccctgctcttgatacttcgaaacctgtctgcaagaagaatcgcaaagaaaatgcactagagattcccagag tctctgttgataaggattgtagaaatagtgttctaaattctcctctaaacgtcagaagtcctgagtttactgaacgttca aaatctgattttctagcaaattatgtcgagcctcttcttcgtatgaagccaaccgactctatctactttgagactaatgt acccagacctgatagaacagatgggatatcaaagtttcaaagccagaaaaataaagaggttgttgagctaatgagacaaa tgacagatgttgaaactggcactgatgactctttcggaaattgtgctaaatcaccaagagaagattccgccgaaaggaac attgagaataattacaatgtagaaatgtcttgtgaaagtctttcagccggggtacacgaaaatcgacagaatgtcaacaa gtttgaggatacctctgtgcctactaatgttgatcctggagaaaatacttcacctaacaacgcattacgtgtaagtactc gtcctgtgattgcctctgaacctgccgtcgagagtcgctcattaagtattcgtgaaagtcgcacagaacaagactctatt gagaatcatcaatcaggatctgttttgattaataatttagaacaacatgttgattacggagcttctggataccatgacga agcttattttgagaatagtaggaatagaagctctcctcttgagaataacgaacacgagatatttgaagtaaatgattttg acaatagagaggaatttgatcttcaaaacggagcatctgcattaaggacttttgaagaagcttcagcttggaatgagtca tcactgaatgaacaggaaattcaagaagccagttgcccaactgctcaaggatttgacgagtttgctgatgagccaagatg gagagtttcaaatacaagaaacaccgccttgacagcatcctctcacattggtaaagactttgtagacaattgcaggcctt gttgttttgacgccttcttgaacattgagaacatgtgtcaggtattgtggaaaaggaaggcttggtcatttagcagaagt cctttgaatgctatactaaaccatgaaatatctataaagtttttaccaagaatccctgttgaggtcataggaggagttat ggtatttgatgacccgaactgttttccaagaaaatctcatctggacccggcttggaacttttctgtaggtgttcatccaa aacacgctccttttcttacagatgcacagtttggcatactctctacgtttatccaagggaaaggttctccagctctgggt accataggttacgatcatagtcagaacgaaaaattctgggatatacagaacgaagtcttctgtaagttgttagggttgag tcgccctgacaaaccgatcatcatttatatcaaaggagaggagggtgatatatttgggtcagagctacataagaagtgtt taaagaagttgcaaaagagatgtccaagagatcagctgattcatctgcattcgtttagaggttcatccgatgatgtaaac aattggatatctaccttcccaaattgctattttggattttcgtggatggttaaggatttcgttgccgatcagtggagtgc attcaggagtgtacccatggagaggatattattggagactggaattgtacacagatttaggcagagaaatcccagaatgg caaaaggtagtattaagagacccgctcacttaggagatctggctgcaatgctagcatccgtaagggttatggatttcgaa ccctttttacgtcagactgtggaaaatggaaaacgtttatacacaaagtag |
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Protein
| Protein ID | pfu_aug2.0_653.1_11035.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11035.t1 MFSCFQNTTWRRHPTSTNTSSLYHDRSDSRQAPASKMRKTCPASLPEKDAIHGNFENKKKKHVHFSSVMSLTYGLNGGRP RACRDPLSFLTFDDNMSLTTYLPDKTSIRRTLYDSHWHGNNQHVQAEHYSTISMFVANESDEPSAAIIDKSSGYQSKKNR EVFELMNYISTMEDLRGSGRNVSLTDKEASAPENHTESTVEKNEENLPQTYVDSQFGTCAKLKHSCENNEELINQTHGKP TFKNLENGEEYSDDNLAETPMEFDAQPIFENQVKSHGGLALEKDEENSLKNSIDDDSEKPRESTVENPNEFVLENRSDST VINSLETYFEDCTEPVLEKCSEPTDVAQTEPVRENLKFSVIENCTEPVLEKHSEHTVVALTEPLLENLISYSHENFEEPD LENGSEPTVVAHSEPVLGYERPSARKICIKPIHENRSKSTDVAFTGPALENCPESAVVVHTEPALRNERPSACGKSTESV LKDHTKPTVLAHTEPVGENLRFTASENCTGPALDTSKPVCKKNRKENALEIPRVSVDKDCRNSVLNSPLNVRSPEFTERS KSDFLANYVEPLLRMKPTDSIYFETNVPRPDRTDGISKFQSQKNKEVVELMRQMTDVETGTDDSFGNCAKSPREDSAERN IENNYNVEMSCESLSAGVHENRQNVNKFEDTSVPTNVDPGENTSPNNALRVSTRPVIASEPAVESRSLSIRESRTEQDSI ENHQSGSVLINNLEQHVDYGASGYHDEAYFENSRNRSSPLENNEHEIFEVNDFDNREEFDLQNGASALRTFEEASAWNES SLNEQEIQEASCPTAQGFDEFADEPRWRVSNTRNTALTASSHIGKDFVDNCRPCCFDAFLNIENMCQVLWKRKAWSFSRS PLNAILNHEISIKFLPRIPVEVIGGVMVFDDPNCFPRKSHLDPAWNFSVGVHPKHAPFLTDAQFGILSTFIQGKGSPALG TIGYDHSQNEKFWDIQNEVFCKLLGLSRPDKPIIIYIKGEEGDIFGSELHKKCLKKLQKRCPRDQLIHLHSFRGSSDDVN NWISTFPNCYFGFSWMVKDFVADQWSAFRSVPMERILLETGIVHRFRQRNPRMAKGSIKRPAHLGDLAAMLASVRVMDFE PFLRQTVENGKRLYTK |
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