Gene
| Gene Model ID | pfu_aug2.0_653.1_11036 |
|---|---|
| Locus | scaffold653.1 : 35948 ... 40315 : - |
| To GenomeBrowser | scaffold653.1:35948..40315 |
| Genes list of scaffold | scaffold653.1 |
| Synonym | pfu_aug1.0_6087.1_09272 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_653.1_11036.t1 | 1 | 1 | Cu_amine_oxid | 401 | 825 | 0.0 | 300.5 | 0.0 | 0.0 | 300.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_653.1_11036.t1 | gi|690423698|ref|XP_009325061.1| | PREDICTED: LOW QUALITY PROTEIN: membrane primary amine oxidase [Pygoscelis adeliae] | 0.0 |
| pfu_aug2.0_653.1_11036.t1 | gi|564239167|ref|XP_006276438.1| | PREDICTED: membrane primary amine oxidase-like [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_653.1_11036.t1 | gi|729726200|ref|XP_010584047.1| | PREDICTED: membrane primary amine oxidase-like [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_653.1_11036.t1 | gi|686585343|ref|XP_009281707.1| | PREDICTED: membrane primary amine oxidase-like [Aptenodytes forsteri] | 0.0 |
| pfu_aug2.0_653.1_11036.t1 | gi|742164631|ref|XP_010884017.1| | PREDICTED: amiloride-sensitive amine oxidase [copper-containing] [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_653.1_11036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11036.t1 atggcacccactgaagagtactgtaggctagcatgggaatgcggtcaagtgcgcttgacttcagaccctttcttcgggct ccctagtcgcttcacgttacaacttggtggcagcggtggtatagtaaatgacagtcacggtcacgatcacgatgatcatg gtcacgatagtaggggacgatttctgcgtccgaacgatgacagtcatccgtttactataggtactggagaaaagacaaca gagagacatagtccttttggcaacacagaagatccgacaacaacaacaacaagaacgacaacagatgacgcaacaacagt tgatacgcccccgtcaacacaggcaacttgtagcgtgtgctcgtggagaaatccattggtccaatcagacaagccggaaa tattcgctcctatcacaccggatgaaatgaaacaagtccaagacgcgatgtaccaagcaaagataaccacagtcaaggaa ggtgacgatctagccttcaataaatcgtacatccagtctatggcactctatcctcctattaaagcagacgcattggaata tctggacagaggtggtccggttccagaacgacacgcctgggttagcgtgcaggagggcgcggcagatcctcccaggtaca tgcattataaggtaggacctctgggcaggggatcagaaaatgtcaaaatcgtaaaactcacgacagacaatgaatgtcct ttcgagaaaagaccttacgacacaattgaaattcgacaagtgattctttttgtgatggatgagctatacaaagtgaacga tattttatcggagagttttgattccaggacaccgtatcaggatttatctgtgatgcccacggggcccatgatagatgacg aaggaagaaggactagtcgctttacgctcagtctgagaggtttgggcgatagggactttgattttctgaatatattacct ctacacggtaaggtctatcatgggggaatgaacacgtctaactggtctctgtttgacttgttctacattaaccaagggcc ttttgctaatgtagaagacatgtatactgcttattccacagaccaggtatctaaaattcgatatccagaaggcactcgca aggcaaccgaagaacttacatttccgaaacggaatttttatcaaacattacgagaaaattctgatttcccaggaatttct tcctttgagcccactgggccgcgttacgatatttcgggaaacacggttgaatatttgggctggtcttttactgtagcaac caatcaacataaaggtcccggtgtgtataacgtaaaatttaagaacgaacggattgtttacgagaattctttgagtgaca tcgggctcgtctactccgcggatggttcagggcaggataacattgtgttttcggacgctacattcgggcttggagagtcc cgaaaggcgatgccaggtgttgactgccccgaatacgcatcttacttgcgcacaacgcattggaattccgcctctgtcta tccaatcacaaaacttaccatttgcgtgttcgaaaaggacgcccaagaaccactctggcgtcatatgggaaaagcgatgg aggctggcatgaataacaggtatcttgtcgtgcgatatccaactcagattgggaactatgattacataatcgatttcgaa tttcatttggatggtaaaatggttaccacggcaacggctacagggtttatccaaggttctttttggaatccattcagtga gtatttccaggaggacaaagagagaacaccattcggctacaaagtgagtggaactttagttggtcccattcatgaccata cattcgcgttcaaagtagacatggatgtcgtaaatgagaaaaacgactttgaattaatcaactggaaatacggaagtgtg aaagaagctctagaatccaaagccccgggcggaaaaattaagaaatatccgaactactatttttacaataaaactcggta tattacatgggaatctgttgaaaatgaaacttatttcgatatcgataatataaatcagaaattctggactgtaataaata aagagcacaaaaatatgtggaatgtcagtcgcggatataggatcgtccccatggcgtccgggacacaaaatatcctggat gattacccgagaaacaaagatatttccttcaccaagcatcatttacacgtgacgaaataccacgacgacgaacatttcat taaacctatttataacccagattacgagtccgatccggatattacaacgaaatctatcgacgacatggtcaacggggaat ccattcagaactcagatattgtaacgtggctttcgcttggtttcttgcacattccaacttctgaagatgtaccaatgaca acgcgcgttacaaccggttttacgttgaaacctttcaactttttcgattcgacagccacttttgacattcccgcgcatgc ggtcgggccaaatgatactgttatggacaatgccccacgagcaggcccttgcctatttatgcccatgactgtacaaggct ag |
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Protein
| Protein ID | pfu_aug2.0_653.1_11036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11036.t1 MAPTEEYCRLAWECGQVRLTSDPFFGLPSRFTLQLGGSGGIVNDSHGHDHDDHGHDSRGRFLRPNDDSHPFTIGTGEKTT ERHSPFGNTEDPTTTTTRTTTDDATTVDTPPSTQATCSVCSWRNPLVQSDKPEIFAPITPDEMKQVQDAMYQAKITTVKE GDDLAFNKSYIQSMALYPPIKADALEYLDRGGPVPERHAWVSVQEGAADPPRYMHYKVGPLGRGSENVKIVKLTTDNECP FEKRPYDTIEIRQVILFVMDELYKVNDILSESFDSRTPYQDLSVMPTGPMIDDEGRRTSRFTLSLRGLGDRDFDFLNILP LHGKVYHGGMNTSNWSLFDLFYINQGPFANVEDMYTAYSTDQVSKIRYPEGTRKATEELTFPKRNFYQTLRENSDFPGIS SFEPTGPRYDISGNTVEYLGWSFTVATNQHKGPGVYNVKFKNERIVYENSLSDIGLVYSADGSGQDNIVFSDATFGLGES RKAMPGVDCPEYASYLRTTHWNSASVYPITKLTICVFEKDAQEPLWRHMGKAMEAGMNNRYLVVRYPTQIGNYDYIIDFE FHLDGKMVTTATATGFIQGSFWNPFSEYFQEDKERTPFGYKVSGTLVGPIHDHTFAFKVDMDVVNEKNDFELINWKYGSV KEALESKAPGGKIKKYPNYYFYNKTRYITWESVENETYFDIDNINQKFWTVINKEHKNMWNVSRGYRIVPMASGTQNILD DYPRNKDISFTKHHLHVTKYHDDEHFIKPIYNPDYESDPDITTKSIDDMVNGESIQNSDIVTWLSLGFLHIPTSEDVPMT TRVTTGFTLKPFNFFDSTATFDIPAHAVGPNDTVMDNAPRAGPCLFMPMTVQG |
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