Gene
| Gene Model ID | pfu_aug2.0_653.1_11041 |
|---|---|
| Locus | scaffold653.1 : 84977 ... 96745 : - |
| To GenomeBrowser | scaffold653.1:84977..96745 |
| Genes list of scaffold | scaffold653.1 |
| Synonym | pfu_aug1.0_4246.1_01677 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_653.1_11041.t1 | 1 | 1 | Radial_spoke_3 | 41 | 326 | 0.0 | 413.3 | 0.0 | 0.0 | 412.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_653.1_11041.t1 | gi|676484958|ref|XP_009063506.1| | hypothetical protein LOTGIDRAFT_130261 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_653.1_11041.t1 | gi|72009354|ref|XP_783727.1| | PREDICTED: radial spoke head protein 3 homolog isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_653.1_11041.t1 | gi|291241375|ref|XP_002740588.1| | PREDICTED: radial spoke head protein 3 homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_653.1_11041.t1 | gi|74096277|ref|NP_001027624.1| | radial spoke 3 protein [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_653.1_11041.t1 | gi|591343972|ref|XP_007097325.1| | PREDICTED: radial spoke head protein 3 homolog [Panthera tigris altaica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_653.1_11041.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11041.t1 atgaccacagtgctatcacagaagcctcagggcacttacacattcgccagtcaaccgagggcggtgccacaaagaaagaa gtacagagacactggactttcacaagaatccggtccccctcaatatggcaacattatgtacgacaggcgaattgtcaggg gtaacacatacgctcaacatacactgccagctcatgcccaacctgatcctattgaaattcaacggcaacaagaaaacaga agacgtgcaatagccagaaaaagggcaaaagaacaactacgacctagatcacccgatcctgttgaaggtagaaaacacat cgatgttcaaactgaattatacttggaggaattaagtgaccgtgtagaggaagctgatgtagaggtacagacggacgctt tccttgacagacctccgtcacccatgtacgtcccagcaaagaccggtgttgacattaccacacagatattagaaggagat ctctttgattttgatgttgaagtcaaaccaattttagaagttttagtcggaaagacagtagaacaagccttattagaagt gatggaggaagaagaattagctaacctcagatcgcaacaaagagcttttgaagaattaagaaatgcagaacttgtagaac aacaaagattagaagaacaagagaggaggcatcgagaagaaaaggagagaaggatgaaacaacagagagaaattgcgaaa aaagaaaaagaaacgtcagataagattgctgcccgagcgtttgcacagagttacttggcagatcttgtacctacagtatt tggcacgctatcagacaatggttacttctatgatcctgttgaaagagatattgaacaaggattcatgccatggttgatgg accaagtacaggaacaattaaagaaatctcaacttggacgattggtgctcgacggtttattacgagaggtggttagtcaa aggatggaagcatactcaaagtttgacgttcaacctcaaagcagatcaacgagtacgaaacctgatgataaggccacaga tagtactaataatgctgtacctccaccggctgcagctacaacgtcagagagtgaaaagactgagcagcctgccgagccag cacccgaacagaaacccgaggagggaggtggtgagcagacggagggtggggaggaagacggcggtggtggtggaggcgaa caggccggagacgacgagggagaggaataa |
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Protein
| Protein ID | pfu_aug2.0_653.1_11041.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11041.t1 MTTVLSQKPQGTYTFASQPRAVPQRKKYRDTGLSQESGPPQYGNIMYDRRIVRGNTYAQHTLPAHAQPDPIEIQRQQENR RRAIARKRAKEQLRPRSPDPVEGRKHIDVQTELYLEELSDRVEEADVEVQTDAFLDRPPSPMYVPAKTGVDITTQILEGD LFDFDVEVKPILEVLVGKTVEQALLEVMEEEELANLRSQQRAFEELRNAELVEQQRLEEQERRHREEKERRMKQQREIAK KEKETSDKIAARAFAQSYLADLVPTVFGTLSDNGYFYDPVERDIEQGFMPWLMDQVQEQLKKSQLGRLVLDGLLREVVSQ RMEAYSKFDVQPQSRSTSTKPDDKATDSTNNAVPPPAAATTSESEKTEQPAEPAPEQKPEEGGGEQTEGGEEDGGGGGGE QAGDDEGEE |
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