Gene
| Gene Model ID | pfu_aug2.0_653.1_11046 |
|---|---|
| Locus | scaffold653.1 : 209764 ... 231490 : - |
| To GenomeBrowser | scaffold653.1:209764..231490 |
| Genes list of scaffold | scaffold653.1 |
| Synonym | pfu_aug1.0_550.1_36579 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_653.1_11046.t1 | 2 | 1 | eIF2A | 503 | 611 | 1.4e-06 | 28.1 | 0.0018 | 5.3 | 6.7 |
| pfu_aug2.0_653.1_11046.t1 | 6 | 1 | WD40 | 506 | 539 | 7.4e-35 | 117.5 | 9.2e-05 | 0.27 | 11.1 |
| pfu_aug2.0_653.1_11046.t1 | 6 | 2 | WD40 | 544 | 576 | 7.4e-35 | 117.5 | 0.00029 | 0.87 | 9.5 |
| pfu_aug2.0_653.1_11046.t1 | 6 | 3 | WD40 | 588 | 622 | 7.4e-35 | 117.5 | 2.6e-12 | 7.6e-09 | 35.1 |
| pfu_aug2.0_653.1_11046.t1 | 6 | 4 | WD40 | 631 | 671 | 7.4e-35 | 117.5 | 1.1e-10 | 3.2e-07 | 29.9 |
| pfu_aug2.0_653.1_11046.t1 | 2 | 2 | eIF2A | 637 | 757 | 1.4e-06 | 28.1 | 4.8e-07 | 0.0014 | 18.3 |
| pfu_aug2.0_653.1_11046.t1 | 6 | 5 | WD40 | 677 | 695 | 7.4e-35 | 117.5 | 0.17 | 520.0 | 0.7 |
| pfu_aug2.0_653.1_11046.t1 | 6 | 6 | WD40 | 720 | 756 | 7.4e-35 | 117.5 | 2.0e-13 | 6.0e-10 | 38.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_653.1_11046.t1 | gi|524909915|ref|XP_005109850.1| | PREDICTED: cell division cycle protein 20 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_653.1_11046.t1 | gi|676452820|ref|XP_009053154.1| | hypothetical protein LOTGIDRAFT_206325 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_653.1_11046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11046.t1 atggctcacttcaattttgagaacttggtgaatgaagtgacaaggatggatggtgacatcagtgcaggacctttggcacg atgggagaggaaggcttccaaagggaaaattgacagattggatggagattggaaagaggtacatgtaagaattgtgacag attggatggaggtaagaaatgtggcagattggatggagttaagaatagtgacagattggacggaagtaaagaaatgtgac agattggacggaggtaagaaatgtaacaaattgcacagagaggtaagaattgtgacagaatggatggaggtaaggaatgt gagggattggacggaggtaagaatagtgacagattggatggaggtaagaattgtaacagattggatgaagataagaatag tgacagattggatggaggtaagaattgagagcagattggatgaaggtaagaatagtgacagattggatggaggtaagaat tgtgacagaatggatagaggtaagaattgtgacagattggatgaaggtatgaatagtgacagattggacagaggtaagaa ttgtgacagaatggatagaggtaagaattgtgacagatttgatggaggtaagaattgtgacagaatggatagaggtaaga attgtgacagattggatgaaggtaagaatagtgacagattggatggaggtaagaattgtgacagattggatggaggtaag aactgtgacagattgaatgaaggtaagaatagtgacagattggatagaggtaagaattgtgacagattgaatgaaggtaa gaatagtgacagattggatggaggtaagaactgtgacagattggatagaggtaagaattgtgacagattggatggaggta agaattgtgacagattggatggagctactcccctctctcctcgaaacataaagtcggcaaagacacccaagactgtcaaa actccgctgtctgccaagttgaagacaaaaacgccctcaaaaactcctggaaaatcacagcaattaaagatgagaagtaa aacacccagcaaggattccatggacagattcattcctaacagatccacaactgatatagatttgggctattacaacgtga tgtcaaaagaaaacgtagaggaagaagaagagagtgaagaacagggggcatctcaaagttataaagaacacctggatatg gcactttccaagggacaaaatccaaataatgcaaaaatcctgagttaccaagacaaagcaccggttgctaaagatggatt caacaacaaaatgaaggtgctatacacaggaagtaagtctgcggcccctaaaggtgtatccacacgacagatacctcaac aaccagagagaatccttgatgcaccggatctgttagatgactactatttgaacttactgcactggtcagctgagaacctt ctagccgtagctttgggaggagctgtgtatatatggaatgcagctagtggaaccatagcgcagcttttggagtttcagga tgatgacacctacatctcatctcttgcctggcttaatgaccaatcctctaacatactggctgtaggcaacagtactggaa cagtgcagctttgggatgtacagaatgagaagttattaaggaacatgggtggtcatgctgccagaataggatcactcagc tggaactctcacatatgctcaagtggatcacgatcaggtgccgtacatcaccatgacgtacgagtggctaaccaccatgt gggctccttactcaaccattctcaggaggtgtgtggcttggcctggagtccagacggaagacatctagccagcggaggaa acgacaatgtactaaatatctgggacgcatcactcagtctggagaacgtccaacctgtacatacctttacagaacatcag gcagctgttaaggccctttcctggtgtccatggagtacacaggtgctcgccagcggtggaggaacggctgatcgacacat caggttatggaacgtaacaacagggctgtgcttgtcctcaacagataccaactcacaggtgtcatcgatcctatggtcag atgaatttaaagaaatgatctcaggtcatggctatacccataaccaactgaccatttggaaatatcctcagatgacaaaa gtggctgaactcaggggacataccagtcgtgtgttatgccttacaatgtctccagatggcagcactgttgctagtgcggc agctgacgaaaccattcgtatctggaagtgcttcaagtccagtaaaaaaccgcaagcaacaacaaaaccaaaggaaacca gaaccactatcaggggaggaagcattcgataa |
|
Protein
| Protein ID | pfu_aug2.0_653.1_11046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_653.1_11046.t1 MAHFNFENLVNEVTRMDGDISAGPLARWERKASKGKIDRLDGDWKEVHVRIVTDWMEVRNVADWMELRIVTDWTEVKKCD RLDGGKKCNKLHREVRIVTEWMEVRNVRDWTEVRIVTDWMEVRIVTDWMKIRIVTDWMEVRIESRLDEGKNSDRLDGGKN CDRMDRGKNCDRLDEGMNSDRLDRGKNCDRMDRGKNCDRFDGGKNCDRMDRGKNCDRLDEGKNSDRLDGGKNCDRLDGGK NCDRLNEGKNSDRLDRGKNCDRLNEGKNSDRLDGGKNCDRLDRGKNCDRLDGGKNCDRLDGATPLSPRNIKSAKTPKTVK TPLSAKLKTKTPSKTPGKSQQLKMRSKTPSKDSMDRFIPNRSTTDIDLGYYNVMSKENVEEEEESEEQGASQSYKEHLDM ALSKGQNPNNAKILSYQDKAPVAKDGFNNKMKVLYTGSKSAAPKGVSTRQIPQQPERILDAPDLLDDYYLNLLHWSAENL LAVALGGAVYIWNAASGTIAQLLEFQDDDTYISSLAWLNDQSSNILAVGNSTGTVQLWDVQNEKLLRNMGGHAARIGSLS WNSHICSSGSRSGAVHHHDVRVANHHVGSLLNHSQEVCGLAWSPDGRHLASGGNDNVLNIWDASLSLENVQPVHTFTEHQ AAVKALSWCPWSTQVLASGGGTADRHIRLWNVTTGLCLSSTDTNSQVSSILWSDEFKEMISGHGYTHNQLTIWKYPQMTK VAELRGHTSRVLCLTMSPDGSTVASAAADETIRIWKCFKSSKKPQATTKPKETRTTIRGGSIR |
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