Gene
| Gene Model ID | pfu_aug2.0_655.1_17693 |
|---|---|
| Locus | scaffold655.1 : 135336 ... 151333 : + |
| To GenomeBrowser | scaffold655.1:135336..151333 |
| Genes list of scaffold | scaffold655.1 |
| Synonym | pfu_aug1.0_328.1_36495 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_655.1_17693.t1 | 1 | 1 | Mg_trans_NIPA | 25 | 307 | 0.0 | 267.1 | 0.0 | 0.0 | 266.8 |
| pfu_aug2.0_655.1_17693.t1 | 3 | 1 | EmrE | 60 | 139 | 2.8e-07 | 30.7 | 5.6e-11 | 2.8e-07 | 30.7 |
| pfu_aug2.0_655.1_17693.t1 | 3 | 1 | EamA | 72 | 138 | 6.9e-06 | 26.1 | 1.4e-09 | 6.9e-06 | 26.1 |
| pfu_aug2.0_655.1_17693.t1 | 3 | 2 | EamA | 163 | 199 | 6.9e-06 | 26.1 | 0.21 | 1000.0 | -0.4 |
| pfu_aug2.0_655.1_17693.t1 | 3 | 2 | EmrE | 176 | 245 | 2.8e-07 | 30.7 | 1.2 | 6000.0 | -2.6 |
| pfu_aug2.0_655.1_17693.t1 | 3 | 3 | EamA | 214 | 307 | 6.9e-06 | 26.1 | 0.68 | 3400.0 | -2.0 |
| pfu_aug2.0_655.1_17693.t1 | 3 | 3 | EmrE | 228 | 311 | 2.8e-07 | 30.7 | 0.068 | 340.0 | 1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_655.1_17693.t1 | gi|524903268|ref|XP_005107839.1| | PREDICTED: NIPA-like protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_655.1_17693.t1 | gi|449666389|ref|XP_002158262.2| | PREDICTED: NIPA-like protein 2 isoform X1 [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_655.1_17693.t1 | gi|156350341|ref|XP_001622241.1| | hypothetical protein NEMVEDRAFT_v1g1805 [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_655.1_17693.t1 | gi|156395583|ref|XP_001637190.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_655.1_17693.t1 | gi|564269043|ref|XP_006273300.1| | PREDICTED: NIPA-like protein 2 [Alligator mississippiensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_655.1_17693.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_655.1_17693.t1 atggaagaatcggtttccacggagcccgaactgtcaacctttgccaaaagtttaggcgacaacataagatatcaggatat tctggtaggatgtctactcgccattggaggaaaccttctcatcagtgtctctctaaacatacagaagtacacgcacatga agaactcggagagagctgttcagatccactacgtcaaagagccactttggtggctgggtctgaccctgatggcctttggt gagctaggtaacttctctgcttatggctttgccccggcatccttagtggcacccctaggcactaccactgttatagctaa tatgtttctcgcagcattgtttttgaaagagaagattcgagcagagcacctatttggttctgctttggctatcattggtg ctttcctgttggtagcctttgctgctaagaatgagcaagtgctgaatgctaaagagatctttgttgctctatctcagacc tcctttcttgtgtatatatgtgtagagctgctaatattaggcttgctatttttcatgctgtattataaagatatgaagaa agttgtcatctacttacttatcacatctatcatagcatcgttcacagttatatctgccaaggctgtctctagtatggttc agttgagttttgccggctattcacagttctcttacccgatactctatgttatgttaatcgtcatggggatcacaatagtt atacaagtcagatatttgaatgaggccatgaagagttttgattccacagtagtggtacctaccaactttgtcttctttac aatcagtgcaataatagcaggagttatcttttataaagagttctggggaatgaatggactagagatcttcatgtttttca ttgggtgtatcctgtcatttattggtgtatactttatcaccctgggtaaactatcagccacgtcagctgacgatcatgtg acagaaccatcctcctccacagagtacgcacaacagatctcaccttctttatttccatcatggctgatggcatcggtcaa tgtaggagaggtacaaccaaagtctgaggtcacccacttatcagattcggatcgtgagccattctttccatccaaggtca gcgaggtttcgtcccaggataccctacagagcatggcggagtctcctggtcctgccccccaggcacagtccaattatggt gctacagagtaa |
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Protein
| Protein ID | pfu_aug2.0_655.1_17693.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_655.1_17693.t1 MEESVSTEPELSTFAKSLGDNIRYQDILVGCLLAIGGNLLISVSLNIQKYTHMKNSERAVQIHYVKEPLWWLGLTLMAFG ELGNFSAYGFAPASLVAPLGTTTVIANMFLAALFLKEKIRAEHLFGSALAIIGAFLLVAFAAKNEQVLNAKEIFVALSQT SFLVYICVELLILGLLFFMLYYKDMKKVVIYLLITSIIASFTVISAKAVSSMVQLSFAGYSQFSYPILYVMLIVMGITIV IQVRYLNEAMKSFDSTVVVPTNFVFFTISAIIAGVIFYKEFWGMNGLEIFMFFIGCILSFIGVYFITLGKLSATSADDHV TEPSSSTEYAQQISPSLFPSWLMASVNVGEVQPKSEVTHLSDSDREPFFPSKVSEVSSQDTLQSMAESPGPAPQAQSNYG ATE |
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