Gene
| Gene Model ID | pfu_aug2.0_655.1_17697 |
|---|---|
| Locus | scaffold655.1 : 202939 ... 213219 : - |
| To GenomeBrowser | scaffold655.1:202939..213219 |
| Genes list of scaffold | scaffold655.1 |
| Synonym | pfu_aug1.0_5498.1_02021 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase | GO:0000302 GO:0005747 GO:0006120 GO:0008137 GO:0008340 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_655.1_17697.t1 | 1 | 1 | NDUF_B5 | 7 | 67 | 1.2e-14 | 54.0 | 8.9e-19 | 1.3e-14 | 53.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_655.1_17697.t1 | gi|125978633|ref|XP_001353349.1| | GA22016 [Drosophila pseudoobscura pseudoobscura] | 2.0e-08 |
| pfu_aug2.0_655.1_17697.t1 | gi|194869685|ref|XP_001972500.1| | GG13853 [Drosophila erecta] | 3.0e-08 |
| pfu_aug2.0_655.1_17697.t1 | gi|195428811|ref|XP_002062459.1| | GK16642 [Drosophila willistoni] | 3.0e-08 |
| pfu_aug2.0_655.1_17697.t1 | gi|524892971|ref|XP_005103007.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial-like [Aplysia californica] | 5.0e-08 |
| pfu_aug2.0_655.1_17697.t1 | gi|21356475|ref|NP_652042.1| | lethal (3) neo18, isoform A [Drosophila melanogaster] | 1.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_655.1_17697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_655.1_17697.t1 atgactggaactggagatccagtggagcgttttatggccaagtatatattttccaccccggagaaacagtatgaaagaaa tttgcactacgtgtatatgaaaaacgaatatgatagaatgagtaaaatgcagagtgcagtccagagacacatgaagagaa accaagatttcaagggttggtattacataccgacacccactacacctctatctgaagccaccatgggcgtcgagagtctt ggggaaccagcaagtgaaatcaatatttga |
|
Protein
| Protein ID | pfu_aug2.0_655.1_17697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_655.1_17697.t1 MTGTGDPVERFMAKYIFSTPEKQYERNLHYVYMKNEYDRMSKMQSAVQRHMKRNQDFKGWYYIPTPTTPLSEATMGVESL GEPASEINI |
|