Gene
| Gene Model ID | pfu_aug2.0_658.1_27637 |
|---|---|
| Locus | scaffold658.1 : 64466 ... 66277 : + |
| To GenomeBrowser | scaffold658.1:64466..66277 |
| Genes list of scaffold | scaffold658.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_658.1_27637.t1 | 1 | 1 | Acyl-CoA_dh_1 | 1 | 92 | 1.0e-23 | 84.0 | 1.5e-27 | 1.1e-23 | 83.9 |
| pfu_aug2.0_658.1_27637.t1 | 1 | 1 | Acyl-CoA_dh_2 | 3 | 75 | 3.8e-10 | 40.1 | 6.0e-14 | 4.4e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_658.1_27637.t1 | gi|568959950|ref|XP_006510613.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial isoform X3 [Mus musculus] | 1.99965e-42 |
| pfu_aug2.0_658.1_27637.t1 | gi|350588676|ref|XP_003482700.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like isoform X1 [Sus scrofa] | 8.00001e-42 |
| pfu_aug2.0_658.1_27637.t1 | gi|584013786|ref|XP_006801682.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial-like [Neolamprologus brichardi] | 4.00001e-41 |
| pfu_aug2.0_658.1_27637.t1 | gi|542245812|ref|XP_005459643.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial isoform X2 [Oreochromis niloticus] | 7.00005e-41 |
| pfu_aug2.0_658.1_27637.t1 | gi|499014223|ref|XP_004558176.1| | PREDICTED: isobutyryl-CoA dehydrogenase, mitochondrial [Maylandia zebra] | 8.99998e-41 |
Transcript
| Transcript ID | pfu_aug2.0_658.1_27637.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27637.t1 atggctaccaaattagtgacatcacggaatatagtacgatttgcagctaaagcgttagaggaggactggccagaaaaagt agcattgtgttcaatggctaaattacacgctacagaggaatgctcaaaggtgtgtaacaaagcactacagatgtacgggg gatatggctacctcaaagattatgctgtccaacagtatttaagggataccagagttcatgagattttagagggtacaagt gaggtcatgagaatgttgatatccagggacttgttgacggatggagaacgtaaagtctga |
|
Protein
| Protein ID | pfu_aug2.0_658.1_27637.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27637.t1 MATKLVTSRNIVRFAAKALEEDWPEKVALCSMAKLHATEECSKVCNKALQMYGGYGYLKDYAVQQYLRDTRVHEILEGTS EVMRMLISRDLLTDGERKV |
|