Gene
| Gene Model ID | pfu_aug2.0_658.1_27638 |
|---|---|
| Locus | scaffold658.1 : 66828 ... 81135 : - |
| To GenomeBrowser | scaffold658.1:66828..81135 |
| Genes list of scaffold | scaffold658.1 |
| Synonym | pfu_aug1.0_3958.1_66844 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_658.1_27638.t1 | 1 | 1 | Plus-3 | 381 | 483 | 1.9e-33 | 114.7 | 5.2e-37 | 7.6e-33 | 112.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_658.1_27638.t1 | gi|676437888|ref|XP_009048349.1| | hypothetical protein LOTGIDRAFT_53767, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_658.1_27638.t1 | gi|675886118|ref|XP_009028561.1| | hypothetical protein HELRODRAFT_194108 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_658.1_27638.t1 | gi|617515359|ref|XP_007543217.1| | PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X3 [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_658.1_27638.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27638.t1 atgtccaaaagaaagaagagcactgtcttgatagattcagacagcgaggatagtgatagtggttcaaatttagatgaaga tttaaaagcactagcaactaaaaggaagaaacccaatacagaatctcagtcttcaaaacctacgaaaaatgattcagaat ctgaaacctccgatgatgatgatgaactgattattcgaattctgcgtgtagcatcgcgtaatgtaattatgaactcagca ggtgaggtatccgatagttctgatggagaagtctcagactcagatcaagaagaacagttttacgatgggtatgacgagaa tttaattggtgatgaagacgacaggaagatgctagaagctatgacagagaaggaaagagaacaagaactgttcaacagga tagaaagacgtcaagctcttaaaacaagatgtttgtacatgtacaaaatgtatttgcattgtatgtatatgtatcttaca ggtgaggtatccgatagttctgatggagaagtctcagactcagatcaagaagaacagttttacgatgggtatgacgagaa tttaattggtgatgaagacgacaggaagatgctagaagctatgacagagaaggaaagagaacaagaactgttcaacagga tagaaagacgtcaagctcttaaaacaagatttgaaattgagaagaaattgaaacaacagaagaagaaagaacaaaagaag aaagaaaaatacccctcctccacaccacaatccaagatagacttaatatcagccagtgatagaagcaaagaaaggaggaa acaaatggaggaaaaaaaagataacaagaaattctcagcacttacagacttggttaaaaggagggaagaaaaagagaaaa agaaactggaggaagcaaagaaacaagaagagaaacaagatcagaagaagaagccactgaagacgagtgacatctattct gatgatgaggaagatgaagaggaggaggagaggaagcccgaggcagtgaaggaggacaaggcctcagaatctgggtcaga gtcagacagtagcagctcacactcctcagctgtacgctccgactcagaggacgagacgattgaatcctccaggaaaatca gatttattcagaccaaagaggaattaggaaaagtaaggttatcacgacacaaacttgaaaaatggtgtcatatgccattt tttaagaggacggtgatgggttgttatgttaggattggaataggcaaccatgagggcagggcagtgtataggatagcaga aattgtggataccgttgaaacagcaaaaatttatcaactaggatccactagaacaaataaagggctcaggttacggcatg gccaatcagaaagagtctacaggttggagtttgtttcaaatcaagatttcacagactctgaatttttcaagtggaaagag gcaatgactttagctgaccaaccattacccaccgtgaatgaaatcgaaaggaaagctaaattgatcggtgaagcactcaa ctacaaatttaaggacgatgacatagaagagattattcaagaaaagcagaagtttaagaagaatcctcataattatgcag tgaagaaaacccttcttctcaagcaaaaggaaatggctgatttggagggtgacacagcatctcaatataaaatccaacaa gagttggaggaattagaatccagggcgacagagctcgatagaaaaagaaccaacaacatatcatccataaggtaa |
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Protein
| Protein ID | pfu_aug2.0_658.1_27638.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27638.t1 MSKRKKSTVLIDSDSEDSDSGSNLDEDLKALATKRKKPNTESQSSKPTKNDSESETSDDDDELIIRILRVASRNVIMNSA GEVSDSSDGEVSDSDQEEQFYDGYDENLIGDEDDRKMLEAMTEKEREQELFNRIERRQALKTRCLYMYKMYLHCMYMYLT GEVSDSSDGEVSDSDQEEQFYDGYDENLIGDEDDRKMLEAMTEKEREQELFNRIERRQALKTRFEIEKKLKQQKKKEQKK KEKYPSSTPQSKIDLISASDRSKERRKQMEEKKDNKKFSALTDLVKRREEKEKKKLEEAKKQEEKQDQKKKPLKTSDIYS DDEEDEEEEERKPEAVKEDKASESGSESDSSSSHSSAVRSDSEDETIESSRKIRFIQTKEELGKVRLSRHKLEKWCHMPF FKRTVMGCYVRIGIGNHEGRAVYRIAEIVDTVETAKIYQLGSTRTNKGLRLRHGQSERVYRLEFVSNQDFTDSEFFKWKE AMTLADQPLPTVNEIERKAKLIGEALNYKFKDDDIEEIIQEKQKFKKNPHNYAVKKTLLLKQKEMADLEGDTASQYKIQQ ELEELESRATELDRKRTNNISSIR |
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