Gene
| Gene Model ID | pfu_aug2.0_658.1_27639 |
|---|---|
| Locus | scaffold658.1 : 81236 ... 95520 : + |
| To GenomeBrowser | scaffold658.1:81236..95520 |
| Genes list of scaffold | scaffold658.1 |
| Synonym | pfu_aug1.0_134874.1_28356 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_658.1_27639.t1 | 1 | 1 | GBP | 82 | 177 | 1.7e-07 | 30.5 | 5.7e-11 | 2.8e-07 | 29.8 |
| pfu_aug2.0_658.1_27639.t1 | 4 | 1 | FYVE | 332 | 378 | 1.6e-27 | 95.1 | 2.5 | 12000.0 | -3.8 |
| pfu_aug2.0_658.1_27639.t1 | 4 | 2 | FYVE | 410 | 418 | 1.6e-27 | 95.1 | 1.0 | 4900.0 | -2.6 |
| pfu_aug2.0_658.1_27639.t1 | 4 | 3 | FYVE | 495 | 556 | 1.6e-27 | 95.1 | 3.4e-18 | 1.7e-14 | 53.4 |
| pfu_aug2.0_658.1_27639.t1 | 4 | 4 | FYVE | 607 | 669 | 1.6e-27 | 95.1 | 4.6e-19 | 2.3e-15 | 56.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_658.1_27639.t1 | gi|676455400|ref|XP_009053993.1| | hypothetical protein LOTGIDRAFT_117073 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_658.1_27639.t1 | gi|260788334|ref|XP_002589205.1| | hypothetical protein BRAFLDRAFT_213117 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_658.1_27639.t1 | gi|585687834|ref|XP_006820569.1| | PREDICTED: zinc finger FYVE domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_658.1_27639.t1 | gi|348573330|ref|XP_003472444.1| | PREDICTED: zinc finger FYVE domain-containing protein 1 [Cavia porcellus] | 0.0 |
| pfu_aug2.0_658.1_27639.t1 | gi|512862255|ref|XP_004917299.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_658.1_27639.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27639.t1 atgacatcattttcaagtgctaaatctgaccatagccatccaagcagtatccctgatatttgcctatcagtagagaaaga gattggcgaacagacaagtctagaagctaggcttgctgaaagcttcatagaagacaatgaaactaatgatctgtattcag atgtgaacagttttatgttattggatgatcaagaaactttgaaaattcttgatgaagatgactttatttccaaacttgga tgtggcaaggatgatttggtcaaagttgtatcaatatttggtaatactggagatgggaaatcatataccttaaactacac cttttttggacagaaggaagtattcaaaacttcttcttgtcagtcttcatgcactataggagtgtgggctgcatttgatc caaaggaaaaagttgtcacaatcgatacagagggacttcttggtataacaacaaatcagaatcaacgaatgcggcttcta cttaaagttttggcaatttctgatgtgattatttatcgtacacgtgcagagagactacacacagacatgttccagtttct ctgtgatgcatcggctgcatacactaagcacttctcagaagaactggaggccacagcaaaacgatgcgggaaaactataa cggatctcacgccttcgcttctcatcttccatgaaactgtcaatacccaagttttaggtggcactcaaaatggaggaaag tcggcagaacagcatatatgggattcctttggtaagatgcagtgtacaatgcattttaaagatcttacttacattggtac gcagaccactcgaccacccacagatttcaaccagttcaaggtggcagtcagtaaacagctggcagatagatcaagacgag ctgctagaagaccaggggtggtctatcaaactctgaggaatttaaatgacaagtttaatggtgaagtggagaaaacagta tatggaacattccctgatcagatattttcctgttcaaagaaatgtctttcatgtggtgagggatgtacaaggagtatgaa ccactgccttgactctgttccacatgaaacagagaaaagatgtaaatatcaacatcagtttgaaaataaagtgtacttat gcaagcgttgtttactgggtgggaaagtcaatattgtgatacctaaaacatcagaatccaaagataatgcttggacagga cttatcaaatatgtatgggcaggagaggtgttggagtgtccaaactgtggagttatttatagaagtcgtcagaattggta tgggaataaggaaatagaggacgtggtcagtgtggaaatacggcatgtatggcctgatggctaccagatgttacagggga ccagtaatgcagctaggaaggtgatagatggtatacattacattacagattcaatcaccagtgttggatcaaagccaact aaaatgatttctgattggatgacagacagaatcgcaccagagtattgggtcccaaattctcaaatcacgcactgtgagaa ttgtaaggtagagcttgaaacagagcagaaacaccattgtcgtgcatgtgggaaaggtttctgtgatgagtgctcctcaa agaagaggagagtaccagagagaggatggggtgatatggtggtcagagtctgtgatagatgcttcaatggaaaatccatg actgattccaacaaaagtgatggtgggtcacaggtaacggccagatgtgtaggggaagttgtgtcgtctgctataagtgt tgctgcttctacattcaattatcctattgggatgatcaaagacacagctcgacctgcgtattggattccagatgagcaga taagaaactgttatgtatgtgatcaagtgtttggaccaaaattacgaatacatcactgccgagcttgtggtaatggggtg tgtgaggtatgctccccaaggaagagaccagtacccctcaggggctgggattaccctgttagggtgtgtactaaatgtga acacaagagggacagattataa |
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Protein
| Protein ID | pfu_aug2.0_658.1_27639.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27639.t1 MTSFSSAKSDHSHPSSIPDICLSVEKEIGEQTSLEARLAESFIEDNETNDLYSDVNSFMLLDDQETLKILDEDDFISKLG CGKDDLVKVVSIFGNTGDGKSYTLNYTFFGQKEVFKTSSCQSSCTIGVWAAFDPKEKVVTIDTEGLLGITTNQNQRMRLL LKVLAISDVIIYRTRAERLHTDMFQFLCDASAAYTKHFSEELEATAKRCGKTITDLTPSLLIFHETVNTQVLGGTQNGGK SAEQHIWDSFGKMQCTMHFKDLTYIGTQTTRPPTDFNQFKVAVSKQLADRSRRAARRPGVVYQTLRNLNDKFNGEVEKTV YGTFPDQIFSCSKKCLSCGEGCTRSMNHCLDSVPHETEKRCKYQHQFENKVYLCKRCLLGGKVNIVIPKTSESKDNAWTG LIKYVWAGEVLECPNCGVIYRSRQNWYGNKEIEDVVSVEIRHVWPDGYQMLQGTSNAARKVIDGIHYITDSITSVGSKPT KMISDWMTDRIAPEYWVPNSQITHCENCKVELETEQKHHCRACGKGFCDECSSKKRRVPERGWGDMVVRVCDRCFNGKSM TDSNKSDGGSQVTARCVGEVVSSAISVAASTFNYPIGMIKDTARPAYWIPDEQIRNCYVCDQVFGPKLRIHHCRACGNGV CEVCSPRKRPVPLRGWDYPVRVCTKCEHKRDRL |
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