Gene
| Gene Model ID | pfu_aug2.0_658.1_27641 |
|---|---|
| Locus | scaffold658.1 : 123516 ... 124603 : + |
| To GenomeBrowser | scaffold658.1:123516..124603 |
| Genes list of scaffold | scaffold658.1 |
| Synonym | pfu_aug1.0_3958.1_66846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_658.1_27641.t1 | 1 | 1 | Ras | 6 | 169 | 9.5e-33 | 112.8 | 3.7e-36 | 1.1e-32 | 112.6 |
| pfu_aug2.0_658.1_27641.t1 | 1 | 1 | Miro | 6 | 120 | 1.5e-13 | 51.3 | 6.7e-17 | 2.0e-13 | 50.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_658.1_27641.t1 | gi|12842616|dbj|BAB25667.1| | unnamed protein product [Mus musculus] | 7.0e-36 |
| pfu_aug2.0_658.1_27641.t1 | gi|113677786|ref|NP_001038266.1| | rho-related GTP-binding protein RhoJ [Danio rerio] | 8.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_658.1_27641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27641.t1 atgaaaaaggctataaagtgtgctgttgttggaaacggaatggttggcaaaacgagcttagccaaattgataaccatggg aaaacatcctgaaaagtatgaagccacggtttttgatcagtatgaagggtgtgtgtcacatgctgggaaacaatacaagt tgaatgtcttcgacacaactggagagcatgatcacaaagacctgaggtgtttttgctacagaggtagtgatgtatttatc gtctgctactcggctattgatagagactcgtatgaaagcatcaaagacttttggattccggagatccgctttctttgtcg gccgaaaacacctatcattttagttgcaacacaaactgacgcaaaatgtgaatatgactctaaaatttcaacgacagaag gaattgtgttggctgaggaaatcggggctcaacattttgctgaatgctccagtagctcgtgcttaggaatccatttagtg attgaaaaaacaatatcatctgttttgaaaaaaagacaacagactggatatctgttaaagcgcgttcttggaaaatga |
|
Protein
| Protein ID | pfu_aug2.0_658.1_27641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27641.t1 MKKAIKCAVVGNGMVGKTSLAKLITMGKHPEKYEATVFDQYEGCVSHAGKQYKLNVFDTTGEHDHKDLRCFCYRGSDVFI VCYSAIDRDSYESIKDFWIPEIRFLCRPKTPIILVATQTDAKCEYDSKISTTEGIVLAEEIGAQHFAECSSSSCLGIHLV IEKTISSVLKKRQQTGYLLKRVLGK |
|