Gene
| Gene Model ID | pfu_aug2.0_658.1_27642 |
|---|---|
| Locus | scaffold658.1 : 135716 ... 151655 : - |
| To GenomeBrowser | scaffold658.1:135716..151655 |
| Genes list of scaffold | scaffold658.1 |
| Synonym | pfu_aug1.0_60898.1_41749 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_658.1_27642.t1 | 2 | 1 | V-SNARE | 16 | 92 | 1.6e-15 | 57.0 | 5.3e-19 | 1.6e-15 | 57.0 |
| pfu_aug2.0_658.1_27642.t1 | 2 | 2 | V-SNARE | 153 | 178 | 1.6e-15 | 57.0 | 0.031 | 92.0 | 3.3 |
| pfu_aug2.0_658.1_27642.t1 | 4 | 1 | NHL | 320 | 339 | 9.7e-06 | 25.2 | 0.011 | 32.0 | 4.7 |
| pfu_aug2.0_658.1_27642.t1 | 4 | 2 | NHL | 396 | 422 | 9.7e-06 | 25.2 | 0.0081 | 24.0 | 5.1 |
| pfu_aug2.0_658.1_27642.t1 | 4 | 3 | NHL | 453 | 463 | 9.7e-06 | 25.2 | 0.085 | 250.0 | 1.9 |
| pfu_aug2.0_658.1_27642.t1 | 4 | 4 | NHL | 485 | 500 | 9.7e-06 | 25.2 | 1.3e-05 | 0.038 | 13.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_658.1_27642.t1 | gi|676442223|ref|XP_009049739.1| | hypothetical protein LOTGIDRAFT_141904 [Lottia gigantea] | 2.0e-39 |
| pfu_aug2.0_658.1_27642.t1 | gi|524901049|ref|XP_005106939.1| | PREDICTED: vesicle transport through interaction with t-SNAREs homolog 1B-like [Aplysia californica] | 4.0e-39 |
| pfu_aug2.0_658.1_27642.t1 | gi|260831100|ref|XP_002610497.1| | hypothetical protein BRAFLDRAFT_117821 [Branchiostoma floridae] | 3.0e-26 |
| pfu_aug2.0_658.1_27642.t1 | gi|156384851|ref|XP_001633346.1| | predicted protein [Nematostella vectensis] | 7.0e-25 |
| pfu_aug2.0_658.1_27642.t1 | gi|291242431|ref|XP_002741116.1| | PREDICTED: vesicle transport through interaction with t-SNAREs homolog 1B-like [Saccoglossus kowalevskii] | 3.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_658.1_27642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27642.t1 atgtcatctgagaaatttgagtctttagaggatgatttaattcttctgttagaaagtctcaaggagagggttgaaaggaa gattcctagttatgcaggagaggagagaaagacagcgattaaacatgcagaaagaaatctggaggaggccaatgttattg tacaagaaatggaagaggaagctaaagttgcacctataagctacaggacacaaatgttaggaaagttacgcagtcacaaa cgagacctggagcagctatctcgatctctgaagaaaggaggaggcgctcagagtggtggaacagacaattttggatttga cagagaagatttgacagacacagacacaaatcttggtaaaagtaggaaaatccttaaaacaatggcaatgcgggtgatga ccaacaagatgattctgatcgtggtgattttattagaacttggaatattagctaaagaaagtcaacaaaaagatgttgaa gagaaatcgaaggctttgaacaaaaatgaaaattctatagaaaatttgttggaacaatgcgacacgcatgaagcatcacg tgatatttctattttcaaatttgtcattgaatgccctcactccgttgatttccctccaaatgaggttagtgtaggtcaaa tcaaatttgtatctaggtcagtttctttatccgatatcgagcagatcatcggaaaagtcatgacagattcgaaatctgac aacgaaaataaaactcggtcttctgaaaagaataaccagactgttgacaataaaatcacacgatctttcatggctccttt ttctgaaagtgtatttaacaagggtgcatctgtcatacagtatgaaaagtcaaatcatgtatggatgacaaatgtcaatt caagtacactttacttgtataactcgcaaggttcaaaggtcacctccatatatgcagggtttaaaatctttggatttgac atggatggtaacggtgatttcatcgctactaattgcgacaacaataaagtaaagaaaataacaaggtcgggtaaggtaac caccatcatcagctcactaccccttggtgtatttgtgaatcacaaacaggagattgtgttgtgtttgtatggatctgatg ccttgtatgtgtactcacctgatggtcgtagactagtacgtaagataggggagggaagtgggttattcacacagccaaac agacttactcagaacggtaaccaggactactgtgtggtggatggttataagagagtggtggtagtagatgaaggtgggtc acatagatggacgtacgacggagagcagggggaggagttaaatccggctagtatagcctgtgatggttatcagtgtctag ttatctctgattgtagaaatcataagatacatctggtagataaagacggtcacttcatacaggttttactgacaagggag gctgggatagaatttcctaggggagtgtgtgttgataaagatggaaagttgtgggttgggcaaaaagataggaaagttca tgttgtcaaatataggagtaaataa |
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Protein
| Protein ID | pfu_aug2.0_658.1_27642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_658.1_27642.t1 MSSEKFESLEDDLILLLESLKERVERKIPSYAGEERKTAIKHAERNLEEANVIVQEMEEEAKVAPISYRTQMLGKLRSHK RDLEQLSRSLKKGGGAQSGGTDNFGFDREDLTDTDTNLGKSRKILKTMAMRVMTNKMILIVVILLELGILAKESQQKDVE EKSKALNKNENSIENLLEQCDTHEASRDISIFKFVIECPHSVDFPPNEVSVGQIKFVSRSVSLSDIEQIIGKVMTDSKSD NENKTRSSEKNNQTVDNKITRSFMAPFSESVFNKGASVIQYEKSNHVWMTNVNSSTLYLYNSQGSKVTSIYAGFKIFGFD MDGNGDFIATNCDNNKVKKITRSGKVTTIISSLPLGVFVNHKQEIVLCLYGSDALYVYSPDGRRLVRKIGEGSGLFTQPN RLTQNGNQDYCVVDGYKRVVVVDEGGSHRWTYDGEQGEELNPASIACDGYQCLVISDCRNHKIHLVDKDGHFIQVLLTRE AGIEFPRGVCVDKDGKLWVGQKDRKVHVVKYRSK |
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