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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_660.1_01017
Locus scaffold660.1 : 151546 ... 157027 : +
To GenomeBrowser scaffold660.1:151546..157027
Genes list of scaffold scaffold660.1
Synonym pfu_aug1.0_158.1_36319

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_660.1_01017.t1 1 1 CUB 2 94 3.7e-08 33.4 1.0e-10 9.5e-08 32.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_660.1_01017.t1 gi|676480936|ref|XP_009062220.1| hypothetical protein LOTGIDRAFT_154773 [Lottia gigantea] 9.0e-39
pfu_aug2.0_660.1_01017.t1 gi|17508091|ref|NP_493560.1| SOL-2 [Caenorhabditis elegans] 1.0e-16
pfu_aug2.0_660.1_01017.t1 gi|170590111|ref|XP_001899816.1| CUB domain containing protein [Brugia malayi] 9.0e-16
pfu_aug2.0_660.1_01017.t1 gi|391329574|ref|XP_003739246.1| PREDICTED: suppressor of tumorigenicity 14 protein-like [Metaseiulus occidentalis] 5.0e-15
pfu_aug2.0_660.1_01017.t1 gi|308470946|ref|XP_003097705.1| hypothetical protein CRE_14202 [Caenorhabditis remanei] 5.0e-15

Transcript
Transcript IDpfu_aug2.0_660.1_01017.t1
Definition-
>pfu_aug2.0_660.1_01017.t1
atgagtagatgcacgtggatcatcaaggtcaaggacaaccagaagatacttttgaccttgacagatctggacataaacag
tagtaataatggcaaatgtagcgagtcgtttctgacagtttataatggcttcgccattccgggaatgtatcctgaggaaa
cgtactgtggaaatctgcatgaattaactccgaggcgccaggagtttctctccaccacaccaaggattgttataaggcta
gaggggaaactttccgaaacaggaagaggattcaaattggcgtggacagctgttgatctcataaatgcagattactgcta
tggcttcctgtgtccgggttctaacgaatgtgaagataaaggagggaaatgtccggctcaacaagtcaaattctgtatag
atagctcactgagatgcaacgacttgccaaactgtggtgctgaggataatgccgacgaaaagggttgtatcctcaccatt
gtttggattatagtctatacagtaatacctcttctagtgattgtaattttagtaacaaccattgtgttatgctatcgtcg
ccacaagaggaagagacttcgtatgattaaaaccgaagcacaaatggctcaacaaacacactgggtgtcaccacatatac
gtagtctggattctagtccgactcaaaatagaacaacgatacacaccacttccttcgtatcagacaaacattcgagtgat
cctgatttgtcagattcaaaacgagtcactattgttgataataacaaaagtgaattgaagaattacagcagagggagtcc
aaattgtaacgacatatcgaattctaggaaatcgaaccagacggtgaaccaaaaagtgactccaattgaagatgacagga
aggaagtgacccatgtccatttagaacctattaataacattccacctaatttcaaatcacatcaaaagcgctcgtcatac
catctcatgcaagaacttaatttagaggactcctctatatcttag

Protein
Protein IDpfu_aug2.0_660.1_01017.t1
Definition-
>pfu_aug2.0_660.1_01017.t1
MSRCTWIIKVKDNQKILLTLTDLDINSSNNGKCSESFLTVYNGFAIPGMYPEETYCGNLHELTPRRQEFLSTTPRIVIRL
EGKLSETGRGFKLAWTAVDLINADYCYGFLCPGSNECEDKGGKCPAQQVKFCIDSSLRCNDLPNCGAEDNADEKGCILTI
VWIIVYTVIPLLVIVILVTTIVLCYRRHKRKRLRMIKTEAQMAQQTHWVSPHIRSLDSSPTQNRTTIHTTSFVSDKHSSD
PDLSDSKRVTIVDNNKSELKNYSRGSPNCNDISNSRKSNQTVNQKVTPIEDDRKEVTHVHLEPINNIPPNFKSHQKRSSY
HLMQELNLEDSSIS

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