Gene
| Gene Model ID | pfu_aug2.0_660.1_01017 |
|---|---|
| Locus | scaffold660.1 : 151546 ... 157027 : + |
| To GenomeBrowser | scaffold660.1:151546..157027 |
| Genes list of scaffold | scaffold660.1 |
| Synonym | pfu_aug1.0_158.1_36319 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_660.1_01017.t1 | 1 | 1 | CUB | 2 | 94 | 3.7e-08 | 33.4 | 1.0e-10 | 9.5e-08 | 32.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_660.1_01017.t1 | gi|676480936|ref|XP_009062220.1| | hypothetical protein LOTGIDRAFT_154773 [Lottia gigantea] | 9.0e-39 |
| pfu_aug2.0_660.1_01017.t1 | gi|17508091|ref|NP_493560.1| | SOL-2 [Caenorhabditis elegans] | 1.0e-16 |
| pfu_aug2.0_660.1_01017.t1 | gi|170590111|ref|XP_001899816.1| | CUB domain containing protein [Brugia malayi] | 9.0e-16 |
| pfu_aug2.0_660.1_01017.t1 | gi|391329574|ref|XP_003739246.1| | PREDICTED: suppressor of tumorigenicity 14 protein-like [Metaseiulus occidentalis] | 5.0e-15 |
| pfu_aug2.0_660.1_01017.t1 | gi|308470946|ref|XP_003097705.1| | hypothetical protein CRE_14202 [Caenorhabditis remanei] | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_660.1_01017.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_660.1_01017.t1 atgagtagatgcacgtggatcatcaaggtcaaggacaaccagaagatacttttgaccttgacagatctggacataaacag tagtaataatggcaaatgtagcgagtcgtttctgacagtttataatggcttcgccattccgggaatgtatcctgaggaaa cgtactgtggaaatctgcatgaattaactccgaggcgccaggagtttctctccaccacaccaaggattgttataaggcta gaggggaaactttccgaaacaggaagaggattcaaattggcgtggacagctgttgatctcataaatgcagattactgcta tggcttcctgtgtccgggttctaacgaatgtgaagataaaggagggaaatgtccggctcaacaagtcaaattctgtatag atagctcactgagatgcaacgacttgccaaactgtggtgctgaggataatgccgacgaaaagggttgtatcctcaccatt gtttggattatagtctatacagtaatacctcttctagtgattgtaattttagtaacaaccattgtgttatgctatcgtcg ccacaagaggaagagacttcgtatgattaaaaccgaagcacaaatggctcaacaaacacactgggtgtcaccacatatac gtagtctggattctagtccgactcaaaatagaacaacgatacacaccacttccttcgtatcagacaaacattcgagtgat cctgatttgtcagattcaaaacgagtcactattgttgataataacaaaagtgaattgaagaattacagcagagggagtcc aaattgtaacgacatatcgaattctaggaaatcgaaccagacggtgaaccaaaaagtgactccaattgaagatgacagga aggaagtgacccatgtccatttagaacctattaataacattccacctaatttcaaatcacatcaaaagcgctcgtcatac catctcatgcaagaacttaatttagaggactcctctatatcttag |
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Protein
| Protein ID | pfu_aug2.0_660.1_01017.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_660.1_01017.t1 MSRCTWIIKVKDNQKILLTLTDLDINSSNNGKCSESFLTVYNGFAIPGMYPEETYCGNLHELTPRRQEFLSTTPRIVIRL EGKLSETGRGFKLAWTAVDLINADYCYGFLCPGSNECEDKGGKCPAQQVKFCIDSSLRCNDLPNCGAEDNADEKGCILTI VWIIVYTVIPLLVIVILVTTIVLCYRRHKRKRLRMIKTEAQMAQQTHWVSPHIRSLDSSPTQNRTTIHTTSFVSDKHSSD PDLSDSKRVTIVDNNKSELKNYSRGSPNCNDISNSRKSNQTVNQKVTPIEDDRKEVTHVHLEPINNIPPNFKSHQKRSSY HLMQELNLEDSSIS |
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