Gene
| Gene Model ID | pfu_aug2.0_660.1_01019 |
|---|---|
| Locus | scaffold660.1 : 167571 ... 183255 : - |
| To GenomeBrowser | scaffold660.1:167571..183255 |
| Genes list of scaffold | scaffold660.1 |
| Synonym | pfu_aug1.0_158.1_36320 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-tyr-2 protein | GO:0004167 GO:0044237 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_660.1_01019.t1 | 3 | 1 | Tyrosinase | 173 | 197 | 2.39622e-43 | 148.8 | 0.097 | 1400.0 | -0.9 |
| pfu_aug2.0_660.1_01019.t1 | 3 | 2 | Tyrosinase | 362 | 450 | 2.39622e-43 | 148.8 | 2.6e-22 | 3.9e-18 | 66.4 |
| pfu_aug2.0_660.1_01019.t1 | 3 | 3 | Tyrosinase | 492 | 636 | 2.39622e-43 | 148.8 | 5.5e-28 | 8.1e-24 | 85.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_660.1_01019.t1 | gi|193202602|ref|NP_492055.2| | TYR-3 [Caenorhabditis elegans] | 2.0e-40 |
| pfu_aug2.0_660.1_01019.t1 | gi|268574620|ref|XP_002642289.1| | C. briggsae CBR-TYR-2 protein [Caenorhabditis briggsae] | 4.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_660.1_01019.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_660.1_01019.t1 atgttaagactcgccatatttgtttctttggttaccgtatgtttttcacacgctggatatagattgtccatccccaatgg aataaatgtaccaaatccttgtcctaatggattcggactttggaatggagtcggacataatgtagaggttggcggtggag acgcaaacgtttttggagcaatgaagagaggactatgtagtcttgtcattctttttctgtttgttttggcggagggatac attgaggaactaaggttaccagatactttctcagaatgccttttcaaacagaaggcgaaaaacaatggcaccgattctta cgaggccagaaacaagtactgtatcaacagtcacagaatgaaaatggccagtgctcatttcacggatatgaatgtttccc aggatgcagtatcgtggataaatgaattactgcgcatgtcaaacgttggtatgaaattcaactttcattacataaacaaa aggcaagttctacaacctattgcactgaaccaacaaaattcacagaatacccaaccattatatcaagtacaattcccaga ccaacccctcattggcggatcatctagccaatcggcgaccaacaaccaaattcaaaatgcgggtcagccttctgtcaatc aacaaatttccagtcaatcaacctttaatcagataccaagtgttccagcctcaaatcagcaacaagctatcgtaccacaa ccacaacctattgtcgtggttcagcctctgtctcagacagccaatcaacctgctgttcaaccgatgtccaatgccgctgc tccatctattccaaacgctgttccgtcaattccaaacgctgttcccttagttccaaacgctgttccgtcagttcaaaacg ctgttccatcacctgctatgcaagccatccctcctcaacccgccgttatacaacccacggtacaagccccgccccctcca cagggtaaccccaggccaaggactctcagaatcaggaaagaaatacgcatgatgactgacagggagagagctgacttctt tagagcaatacagatgttaaaagctgatacgtcaatacgaccaaatagatatgatttcctgggcctggtccatttccgga tggtagacaatatacatcacggtgctgccttcttaccatggcatagagtcttcattactatattcgaaaatgccttacgg cagaaagtacccacagtgacgttaccatactgggactcaacaatggacgaagccatgatagattctacccaatcaaatct atggaccccggaatttataggaaacggaaatggtatagtaaacaacggaccctttgcgttctggcaaactccgaatggtc cgttgattcgtaacatcggtaatgcaggcggagagttgttctccagagatgctatcttcagtatcttgtccagaaatcgc atggctcaaattacagagccagcggctcccgaccaattcgaaaatgccttacgacagaaagtacccacagtgacgttacc atactgggactcaacaatggacgaagccatgatagattctacccaatcaaatctatggaccccggaatttataggaaacg gaaatggtatagtaaacaacggacccttcgcgttctggcaaactccgaatggtccgttgattcgtaacatcggcaatgca ggcggagagttgttctccagagatgctatcttcagtatcttgtccagaaatcgcatggctcaaattacagagccagcggc tcccgaccagtttaatatcgagaactatcacggaaatgttcacacgtggttaggaggtcaaatggaaccaatggaaacgt cagcatttgaccccgttttctacctgcatcatgcttttgtggactatgtatacgaacttttccgacagcgacaaattgcc caaggtatagatccgactcaagactacccggcaaattacggagccgagacgcatgcgccgcttacacctactggctttgg aaacttaccaaatgcgtttggaatgaatcctttgtttacctcagatatctacatataccagcctaacccaacttgctcat accagaatccaaactgtggctccaggcatttaacctgtgacatatctacaggtgtgcctctttgtatccctatagctgtt ggccctcccagaattttaccccctggtcctggacaagcgggcccagcagaagctttcggcatagggccaggtgttccaga tgccggttttggcggacaagcacctccaatattcggtagaaagaagcgacaagccactaggtcaacctatccgattgatt cttcacaattcccaacatgtactggtacatggctctctttctctagtcagaacacattcgagatagatcaggttgctgat accagaaactgggttttcattccggtccggatcgtcacgaaaagaacaccagaacatagggctttcaacgcttacccaat cattgatggatacgcagcaaagaagaaggacatctacgaccctgaattataccaagagattaagccgtatttctcagagt cggtcatgccagcgtcgacaaaatgcaagtccatcacgggtggtcgaacagttggaagggttcatattagatcagatgga atgaattatcagggaaactacgatgaatatgtagttgttgatctgaggcaagcattttcagaatcaatcacttacgtagc actcaaaaatcctaacaaaggcgcaacggaagtcctggtatctgcatttgattcttgcggaaggaaatgcacggcatatt gcagagaccggaataaaggcggatatcataaatgttccggagctctacgtgtaaataatgacacaccttgggaatatggt aaaaactacggtgatgctgtgcgcatgtcttgggatttaaacgatatgaacactattcccgaactacaagatcagtctgt tttcatacaattttactgcagtcacaccagtgaatag |
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Protein
| Protein ID | pfu_aug2.0_660.1_01019.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_660.1_01019.t1 MLRLAIFVSLVTVCFSHAGYRLSIPNGINVPNPCPNGFGLWNGVGHNVEVGGGDANVFGAMKRGLCSLVILFLFVLAEGY IEELRLPDTFSECLFKQKAKNNGTDSYEARNKYCINSHRMKMASAHFTDMNVSQDAVSWINELLRMSNVGMKFNFHYINK RQVLQPIALNQQNSQNTQPLYQVQFPDQPLIGGSSSQSATNNQIQNAGQPSVNQQISSQSTFNQIPSVPASNQQQAIVPQ PQPIVVVQPLSQTANQPAVQPMSNAAAPSIPNAVPSIPNAVPLVPNAVPSVQNAVPSPAMQAIPPQPAVIQPTVQAPPPP QGNPRPRTLRIRKEIRMMTDRERADFFRAIQMLKADTSIRPNRYDFLGLVHFRMVDNIHHGAAFLPWHRVFITIFENALR QKVPTVTLPYWDSTMDEAMIDSTQSNLWTPEFIGNGNGIVNNGPFAFWQTPNGPLIRNIGNAGGELFSRDAIFSILSRNR MAQITEPAAPDQFENALRQKVPTVTLPYWDSTMDEAMIDSTQSNLWTPEFIGNGNGIVNNGPFAFWQTPNGPLIRNIGNA GGELFSRDAIFSILSRNRMAQITEPAAPDQFNIENYHGNVHTWLGGQMEPMETSAFDPVFYLHHAFVDYVYELFRQRQIA QGIDPTQDYPANYGAETHAPLTPTGFGNLPNAFGMNPLFTSDIYIYQPNPTCSYQNPNCGSRHLTCDISTGVPLCIPIAV GPPRILPPGPGQAGPAEAFGIGPGVPDAGFGGQAPPIFGRKKRQATRSTYPIDSSQFPTCTGTWLSFSSQNTFEIDQVAD TRNWVFIPVRIVTKRTPEHRAFNAYPIIDGYAAKKKDIYDPELYQEIKPYFSESVMPASTKCKSITGGRTVGRVHIRSDG MNYQGNYDEYVVVDLRQAFSESITYVALKNPNKGATEVLVSAFDSCGRKCTAYCRDRNKGGYHKCSGALRVNNDTPWEYG KNYGDAVRMSWDLNDMNTIPELQDQSVFIQFYCSHTSE |
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