Gene
| Gene Model ID | pfu_aug2.0_661.1_04456 |
|---|---|
| Locus | scaffold661.1 : 31376 ... 54665 : - |
| To GenomeBrowser | scaffold661.1:31376..54665 |
| Genes list of scaffold | scaffold661.1 |
| Synonym | pfu_aug1.0_6495.1_31211 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_661.1_04456.t1 | 6 | 1 | fn3 | 611 | 683 | 3.5e-12 | 46.2 | 0.68 | 3400.0 | -1.8 |
| pfu_aug2.0_661.1_04456.t1 | 6 | 2 | fn3 | 1067 | 1088 | 3.5e-12 | 46.2 | 0.78 | 3800.0 | -2.0 |
| pfu_aug2.0_661.1_04456.t1 | 6 | 3 | fn3 | 1153 | 1172 | 3.5e-12 | 46.2 | 0.93 | 4600.0 | -2.2 |
| pfu_aug2.0_661.1_04456.t1 | 6 | 4 | fn3 | 1262 | 1330 | 3.5e-12 | 46.2 | 3.3e-05 | 0.16 | 12.0 |
| pfu_aug2.0_661.1_04456.t1 | 6 | 5 | fn3 | 1469 | 1540 | 3.5e-12 | 46.2 | 1.4e-08 | 6.8e-05 | 22.9 |
| pfu_aug2.0_661.1_04456.t1 | 6 | 6 | fn3 | 1580 | 1646 | 3.5e-12 | 46.2 | 8.2e-05 | 0.41 | 10.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_661.1_04456.t1 | gi|260825790|ref|XP_002607849.1| | hypothetical protein BRAFLDRAFT_117284 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_661.1_04456.t1 | gi|260793080|ref|XP_002591541.1| | hypothetical protein BRAFLDRAFT_126745 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_661.1_04456.t1 | gi|260827435|ref|XP_002608670.1| | hypothetical protein BRAFLDRAFT_73893 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_661.1_04456.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_661.1_04456.t1 atgaatctgaataataacagtcgaaaatttggagctgaaagcgataaaggttctgcagtgaactctacaagtgggaaatg tttcaaaaaggaaaatatttatatgaattttcaggcagagtatttgtcattcactttaacatcagagttcagtatcccaa gttataccttaccaatgcatatagccgaattcaaaactggacttattggagctgaaataaatgttctcaagaaggacatt tacggaaaggatacttacataagcagtgaagatttatcagtcggaagctgtgatcgaaatttgacacaagcagcaccatt cccaggaaatccggtatcatgcttccgtaatttgataggaagttcagcgtggacaattaatgatggagaacgaatttgct tacgatatgttgcaaaagctggtggatatctggtatatcaagattttcacaatcggaaatatccccaacagaactacaca tcgactacaaacagctccgaactgtgtgtttaccttgatgtgacgccaccaatgcactgttcagagaatatgtcctgttc ggaagaacctatccagatctcgtccaggatactagataatccaaaagtcgaaataatggcgaacggatggtttgatccat ttccagtcaatcctgatcaagcttcgaaaataaaatcagtatctctttctgtacatgaagttaaggaagtaaataactct acacttacgatggatgagaaatcaatcccagacatgaagttcaatgtttcaggttttccacttgaagtgattcttccaag taaagcccctggtttatatggtctcacattagaagttgttgatcatgcactgaacccaaaatatgccagagtattcgttt tgttcgataactcttccaatcttcttataagaggtgagaagaaactgagagttgatacaggtgatatgactactaactat acttggcagacacatctacgagatgtatgcttatcttggcacggaagatactacaattctttccacgttcattacaattt acttcggaagataaagcctgactaccatggtttctataatggagtgtacgaacagttatcaggtgacctaccggtatcag gtactgtaaacgtggatggaattgtagattttatgtataactggaccaacgtaagaacaaagacagtatcgaaagagaaa tctatcaggctagtgacagaccaacaattctgtgacaattttggaatatctgatggcgactcatttgttatttccatcac atcagttgatataatgaagaaaacaatcacagaagatatcgttcttaacattgattccagtgttccagacataacagaca tgtgggtactcaggaatggagttagacaattgtttgtacataattcaactgaacttcagaacatggttatagagttttca atacttgatatacatagtgggatatattcaatacagtggcagctaggaactactccacatggccatgaactcggtatggg tgctatagcagtacatagacttccggagtccaagacatcctgctcgtcaactcccaattgctactgccctgttattggac tttgtgaacaacatgtgtatcaaatcaacttcaattcactggtcaaaaataacactcacattggactacacaacagagaa tatttctttgcactgaaagcaacgaacaatgcacagctcgtaagcattgagaggacggatatccttgtagacaactcgcc ccctgaggtaggagtggtgtttgaaggcgtatctaatgaaaaggacatcgactatagcagcgaagcaaacctcttcctga actggcatggattccttgatcatgaaagcggaattatgaagtatagagttggagttgatgaccattgtatgacgtcagac gaattgttacattccaatcacaatgcaagtcagatttcacatctctttgaaactgaggaaaatgtcatcaaggtcttgtt acgtggtgaaggaaaatactacgctacagttattgcatacaacaatgcactccagccctcagaaccggtatgctcagatg gaatagtttacgatacaacaccacccatggtagacaatcttataatagacaatggtcattgtagagaggtaatcgcttgt ttcaacaactccgtttacctaataatggataattttacagctgtcgaacttgttcagagtcaagcctgtctcaatagatg tctaaatgcttctgaaagtaacatcattaaatttctcaataagatacaaacaccaagtaatcagaaacttttctccgaaa gtttatgtcagcgactggatgttctatctgataattggttcatttacttaccctctgacaaactggtactgaactggaac cttacagaagataggagtcaaactcgtgaggtcatgatcggcttagcaacaagtgataaatatggaactctcccagacat tcaaggttatatacaaacacggaggctgaatacatattcgcgtttacataatgggattgatagaggtgtccctttctaca tattgataaaggcagtcaacaaagctgatctagagactgtcgcttctataggaccggtcatcattgacgagactccacct cagtataatgggggacttaatgtggagatggatgacaactttgtttatataacatggcataatgactcgttttctgaaat ggaacaaaaagaacaatttggagatgtacttttcagaataggaaatgaggatacttttatgacgccattctatcaagaga gagttattgatagatgtccgatagacccgatgttgtattgtataaggtatcctttgtacaagattcagcagttggacaac gaaaagggagtacagtttactgtagaattatctgtttttaacatcgcaggcttaaatgtacgggttcgaagttcgacttt cacagttccatcgagatttcccccaacagagggtgtagtgctagacattgaaacaggacatgttgaatcacatactgact ttgatttcctttgggaaacaggagaaatatgtgtgtcatggatcggatttcatcatcatgcagatattgattttgagtta ggaatcggaacaacacctagaatggatgatgtgatcccatttgacctagtgaatggatcatcagcctgtttaagaactaa atcattacaaccttggaaccgttatttctcagcaatacgggcaagtaatgcagctggaagtagtataagcagctccgacg gttttgttcttataaccgggaacaaaagtgtaaccgatcccgatatatttgatggcaaagctcgagactttgttggaaat gaagtaaagtcgatatcaccaggcattaccatagattactccgcgccagctactggaatagtatgggttgggaatccata ccaaaaatttcccattgtgtcagcaagcagtctggttgtccactgggaagggttttatgataaagacagcggaatccaaa gaattgatgtcggactaggaagttcaaatgtttctgccgatttaattaacattcgagacgtaaagggaacttcgctcaaa attaaggacattggattcgtcgatggacattactactattctcatataattgtccacaactttgctgatcttatgacaac atcagtatctcgtcctttcatgattgattcctcacctccacatgttggtgtcgtcgttgatggagactcatttgaaaaga ccgacgtggactttcaaagggacgtaacaacgttgtgtgtacattggtacggattccatgatccccattcaaagttatca tattatgaggttagcattggtacagttcctggagacacggatgtactgtattggactaatgtaggactgaaaagagaaga aacatggcacaatctgtttgaagctggagtgaaatattataccactgtaagagcctgtaacacagtaggtttgtgtacag atgctacatcagacggagtgataatggataattctcctcctgtaccaggaatgatacatgtgggccgcagtgacaaccat caacaatacttagctcacaaatttgaatggtctatgggaatagacggagaaaagccaggcgaaggcatatttgatacttt aaaggaagacgtgtggcaagatgtcggtctgaacacagatatcgtccactgtttgccgcctcaacgacaacttttacatg cctatagatacgttctatacgtgcgatcttggatgtcaacgtatgagtatgtcgagtctcaatctagaccgattctcatt gaccaaactcctcccaagataaggaaaggaaaatcaatcatagaaagcaagaaagattgcaagtacgatatcgactatat gaacaacaccgatgttttctacatttcttggtcctctgtcttttcggaacaacaaggacaaattttatactacgaagtgt atggaggatcgtcctataaaggatacgacttactggcaccaacaaatactggaactagaacaagttataaggttgatggt ggtagacttaatcctggtacaacttactatttcacagttgttgcaacaaataacgtaaatctttccacttctcatacgtc tgatggcattcttgtcgatattgataggcctgttactggtgtagttttcaacacaaagtatcataagtctgtcaaacacc acccgtctctagaagaactcggtgtatcatggcacgggtttgatgatcatcagtcatttattagccattacaatgttacc attctcgacgcctttactaacaacaatgttataaacgtgagtagatttggactcaaaaacagcctcgttttacagaatct gatactgaatcaagggtcagtctacaaaattgaggtgacagcaactgatgcagctggacatgtttcagacgtagccgtct cagaggagtttatagtcgatcgttctccgccatacggatatcgatgtgaacagttttccgaaatggagatttctatcctg tccttcaaaagtcctttgactcaagggttgaaggagcatacttcagtcggagaatttaatgtaaccaaaggagaaaagta taaagtaatcatttcattttctgtggccccaacagaagatgaaatatatttaagaataaacgatcatgaaatttctttga agtgtgctcgaaacagcaatggatcggcagtgactgaatacgactttactgggcaaacagatggagagtctaaaatcaga gtcacatatgaagatcatgtgaataatgggacattgcaagtttttcttcaacaatgtcataaagctatatcagataacca gcaagctatgatggtaaagcaaatatccacaaatacactgtacattcagactcgaattcatgatatagaaagtggattaa gattcctaaaagttggtctaggaacatctgagggtggtttgcagatccaacaattcatgtctctacctctaaatggaatc atcaacgtggatcttccacacggaagtcaaattcatggcaaagtttgggctggtaataacgctgggttgtcatccgtgtt taatgcttcagcgattattttcgacaagacgcctcctgtgatatctaattcatcaattaatctatcatacatagttgtcg tttatgatgaaaatgtaacacaactgtatgcaaaacaagagaacatgacatcagataacactttgaaccgaaatacgatt aacaacgctaacgaacattga |
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Protein
| Protein ID | pfu_aug2.0_661.1_04456.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_661.1_04456.t1 MNLNNNSRKFGAESDKGSAVNSTSGKCFKKENIYMNFQAEYLSFTLTSEFSIPSYTLPMHIAEFKTGLIGAEINVLKKDI YGKDTYISSEDLSVGSCDRNLTQAAPFPGNPVSCFRNLIGSSAWTINDGERICLRYVAKAGGYLVYQDFHNRKYPQQNYT STTNSSELCVYLDVTPPMHCSENMSCSEEPIQISSRILDNPKVEIMANGWFDPFPVNPDQASKIKSVSLSVHEVKEVNNS TLTMDEKSIPDMKFNVSGFPLEVILPSKAPGLYGLTLEVVDHALNPKYARVFVLFDNSSNLLIRGEKKLRVDTGDMTTNY TWQTHLRDVCLSWHGRYYNSFHVHYNLLRKIKPDYHGFYNGVYEQLSGDLPVSGTVNVDGIVDFMYNWTNVRTKTVSKEK SIRLVTDQQFCDNFGISDGDSFVISITSVDIMKKTITEDIVLNIDSSVPDITDMWVLRNGVRQLFVHNSTELQNMVIEFS ILDIHSGIYSIQWQLGTTPHGHELGMGAIAVHRLPESKTSCSSTPNCYCPVIGLCEQHVYQINFNSLVKNNTHIGLHNRE YFFALKATNNAQLVSIERTDILVDNSPPEVGVVFEGVSNEKDIDYSSEANLFLNWHGFLDHESGIMKYRVGVDDHCMTSD ELLHSNHNASQISHLFETEENVIKVLLRGEGKYYATVIAYNNALQPSEPVCSDGIVYDTTPPMVDNLIIDNGHCREVIAC FNNSVYLIMDNFTAVELVQSQACLNRCLNASESNIIKFLNKIQTPSNQKLFSESLCQRLDVLSDNWFIYLPSDKLVLNWN LTEDRSQTREVMIGLATSDKYGTLPDIQGYIQTRRLNTYSRLHNGIDRGVPFYILIKAVNKADLETVASIGPVIIDETPP QYNGGLNVEMDDNFVYITWHNDSFSEMEQKEQFGDVLFRIGNEDTFMTPFYQERVIDRCPIDPMLYCIRYPLYKIQQLDN EKGVQFTVELSVFNIAGLNVRVRSSTFTVPSRFPPTEGVVLDIETGHVESHTDFDFLWETGEICVSWIGFHHHADIDFEL GIGTTPRMDDVIPFDLVNGSSACLRTKSLQPWNRYFSAIRASNAAGSSISSSDGFVLITGNKSVTDPDIFDGKARDFVGN EVKSISPGITIDYSAPATGIVWVGNPYQKFPIVSASSLVVHWEGFYDKDSGIQRIDVGLGSSNVSADLINIRDVKGTSLK IKDIGFVDGHYYYSHIIVHNFADLMTTSVSRPFMIDSSPPHVGVVVDGDSFEKTDVDFQRDVTTLCVHWYGFHDPHSKLS YYEVSIGTVPGDTDVLYWTNVGLKREETWHNLFEAGVKYYTTVRACNTVGLCTDATSDGVIMDNSPPVPGMIHVGRSDNH QQYLAHKFEWSMGIDGEKPGEGIFDTLKEDVWQDVGLNTDIVHCLPPQRQLLHAYRYVLYVRSWMSTYEYVESQSRPILI DQTPPKIRKGKSIIESKKDCKYDIDYMNNTDVFYISWSSVFSEQQGQILYYEVYGGSSYKGYDLLAPTNTGTRTSYKVDG GRLNPGTTYYFTVVATNNVNLSTSHTSDGILVDIDRPVTGVVFNTKYHKSVKHHPSLEELGVSWHGFDDHQSFISHYNVT ILDAFTNNNVINVSRFGLKNSLVLQNLILNQGSVYKIEVTATDAAGHVSDVAVSEEFIVDRSPPYGYRCEQFSEMEISIL SFKSPLTQGLKEHTSVGEFNVTKGEKYKVIISFSVAPTEDEIYLRINDHEISLKCARNSNGSAVTEYDFTGQTDGESKIR VTYEDHVNNGTLQVFLQQCHKAISDNQQAMMVKQISTNTLYIQTRIHDIESGLRFLKVGLGTSEGGLQIQQFMSLPLNGI INVDLPHGSQIHGKVWAGNNAGLSSVFNASAIIFDKTPPVISNSSINLSYIVVVYDENVTQLYAKQENMTSDNTLNRNTI NNANEH |
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