Gene
| Gene Model ID | pfu_aug2.0_661.1_04457 |
|---|---|
| Locus | scaffold661.1 : 86075 ... 134896 : + |
| To GenomeBrowser | scaffold661.1:86075..134896 |
| Genes list of scaffold | scaffold661.1 |
| Synonym | pfu_aug1.0_3009.1_51860 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_661.1_04457.t1 | 1 | 1 | SH2 | 274 | 357 | 1.0e-11 | 44.4 | 3.5e-15 | 2.6e-11 | 43.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_661.1_04457.t1 | gi|156407362|ref|XP_001641513.1| | predicted protein [Nematostella vectensis] | 3.0e-19 |
| pfu_aug2.0_661.1_04457.t1 | gi|699238787|ref|XP_002124812.2| | PREDICTED: uncharacterized protein LOC100182506 [Ciona intestinalis] | 6.0e-17 |
| pfu_aug2.0_661.1_04457.t1 | gi|198430059|ref|XP_002124138.1| | PREDICTED: uncharacterized protein LOC100182509 [Ciona intestinalis] | 3.0e-11 |
| pfu_aug2.0_661.1_04457.t1 | gi|410921870|ref|XP_003974406.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit beta-like [Takifugu rubripes] | 2.0e-07 |
| pfu_aug2.0_661.1_04457.t1 | gi|617427469|ref|XP_007560642.1| | PREDICTED: phosphatidylinositol 3-kinase regulatory subunit alpha-like, partial [Poecilia formosa] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_661.1_04457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_661.1_04457.t1 atgcttggagtagaattatatttaattttagtctacggtgaaatcacgagatcgtcacaatgccgccaaggaagaggaaa cagaggcaaagctatagcccctcccaatttgttcagaaagggagacgcaaaatctgacacatgccagacagtgttgcatg tatcagatgagtctacaattaataatgcgtccccttccgtccaatctcttgctgctagcatagacattccagcgctggca tcaaaaattttaaagcaacaaacagtacaatgtcaagaaattgcgtgtgctacacctgtagtacataatgatacgcctgc ggcaacagaagtgtcaacacaatcaacgaacactaattcgtccgttaaagatactgacaatcaatcttcacacagcaatg taatgcacttgattgacaatatttttcaaggtcaaggtcaaatatgcgagattatacagtcaaaattgtcatcgaaagaa actttggagttttggaaaagtgtggatggtacctcggattttgaaagtagatgccatttgaagttctacaaatgcttcat cgataaactaaaaatagatttcccaagtgagccagggctgaaaaatacacggactctcaatgtccttcgcaaacttctgt tgaaaaaggatattcctggtgataccgataaactgcaattggaagctctttgtcgagttgccaacttttttgggccaatc aaattacaaaacgccagatgtgtactggttcaagagatacattatttgatagagaaatctctccaatacaaagataaaag cagaaaagaaaaagttagttggttcgcaggtgacatgacacgagatgaggcggacagtcgtttacagggacaatcagatt acacatatctgataagaatgagccaaacaaatgcagacgacggggattttgcattatcagttgttgttgatggagtcgtc aatcaccttgaaataaaaggacaaccagagaaatctctccacgaagaaccgcacaacgcttgtcttgtgtttaaagacaa agagtacagaaacctgccagatatcatagaagatataagatataacgcctttataagtgaagaggatggcaaagtagtct ggtgtagaaccatctgtcctggattaccgttcaacgctgttatgtctgggtacaagaaagccgcaagacaaaaatga |
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Protein
| Protein ID | pfu_aug2.0_661.1_04457.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_661.1_04457.t1 MLGVELYLILVYGEITRSSQCRQGRGNRGKAIAPPNLFRKGDAKSDTCQTVLHVSDESTINNASPSVQSLAASIDIPALA SKILKQQTVQCQEIACATPVVHNDTPAATEVSTQSTNTNSSVKDTDNQSSHSNVMHLIDNIFQGQGQICEIIQSKLSSKE TLEFWKSVDGTSDFESRCHLKFYKCFIDKLKIDFPSEPGLKNTRTLNVLRKLLLKKDIPGDTDKLQLEALCRVANFFGPI KLQNARCVLVQEIHYLIEKSLQYKDKSRKEKVSWFAGDMTRDEADSRLQGQSDYTYLIRMSQTNADDGDFALSVVVDGVV NHLEIKGQPEKSLHEEPHNACLVFKDKEYRNLPDIIEDIRYNAFISEEDGKVVWCRTICPGLPFNAVMSGYKKAARQK |
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