Gene
| Gene Model ID | pfu_aug2.0_661.1_04459 |
|---|---|
| Locus | scaffold661.1 : 175525 ... 229462 : + |
| To GenomeBrowser | scaffold661.1:175525..229462 |
| Genes list of scaffold | scaffold661.1 |
| Synonym | pfu_aug1.0_60.1_29053 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_661.1_04459.t1 | 2 | 1 | SRCR | 99 | 195 | 3.0e-28 | 98.0 | 6.1e-32 | 3.0e-28 | 98.0 |
| pfu_aug2.0_661.1_04459.t1 | 1 | 1 | SRCR_2 | 108 | 200 | 7.2e-08 | 32.5 | 3.7e-11 | 1.9e-07 | 31.2 |
| pfu_aug2.0_661.1_04459.t1 | 2 | 2 | SRCR | 352 | 360 | 3.0e-28 | 98.0 | 1.8 | 8900.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_661.1_04459.t1 | gi|195998932|ref|XP_002109334.1| | hypothetical protein TRIADDRAFT_53246 [Trichoplax adhaerens] | 4.0e-32 |
| pfu_aug2.0_661.1_04459.t1 | gi|260786540|ref|XP_002588315.1| | hypothetical protein BRAFLDRAFT_224545 [Branchiostoma floridae] | 6.0e-32 |
| pfu_aug2.0_661.1_04459.t1 | gi|260827332|ref|XP_002608619.1| | hypothetical protein BRAFLDRAFT_231213 [Branchiostoma floridae] | 2.0e-31 |
| pfu_aug2.0_661.1_04459.t1 | gi|260825883|ref|XP_002607895.1| | hypothetical protein BRAFLDRAFT_162766 [Branchiostoma floridae] | 4.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_661.1_04459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_661.1_04459.t1 atgagtagaggtgagctaaaaacatacatacactctcatgctagtcagaacctgtactatgctgaagctcgaaaggctat aactagaacccagatatatagacgatgtgctgtccatcaacaattgaaattcacggataaccttagcagaatctatccgt cggagcttgaagtcaaagaaactacagagacaaataattcagcatcctatttggagataattctgtcctataacactgac ggtcacatgaacacctcactctatgacaaagctccagatggatatgttagattggtcgatgggccagattcaaagtctgg aagactggaagtttatcatcaaggcgtttggggtacagtgtgtgatgatggtttcactgacaacgcagcagctgttgttt gccgtatgctaggtttttcgacgacgtatgcaacgcaataccaaacattcaggatttcaggaactggtcaaatatggtta gacgatgtcacttgccaagggaacgaagggaacatttcagaatgtagtcatgcgacatgggggacaaataattgtggaca tggtgaagatgttggtgtatcttgtgcacgtgctggaatgacatccgagagtactggtatgacgtacagtgataccatta tctctataaatccaaatgaccagacctctccgactctggaaggaaatacagagaaggtgatggatgaagcaaaaaggagg ccgtttgtggagggaagaaagaggatgaaggaagagagggaccgggaagtggaaagagcgaggcttgcccaggaagatcc tgaatcagttgttggagagaagaaatggactaatatattatcagattatggccaaaaactgaaattaattgtagttgatg aggcacatacagtcgtacaatggggtatggaaagtaagacagatgaagcatttagagagatgttcagtcatattggggag ctgagatctgtccgaccagatataccgttcttggcactgacagctacatcggcaccaacaaaaagacgtaaaataatgaa aagtttgtgcttcaaagcaaatgcaaaagtgatctgtgaatctccagacagaagtaatatttaa |
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Protein
| Protein ID | pfu_aug2.0_661.1_04459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_661.1_04459.t1 MSRGELKTYIHSHASQNLYYAEARKAITRTQIYRRCAVHQQLKFTDNLSRIYPSELEVKETTETNNSASYLEIILSYNTD GHMNTSLYDKAPDGYVRLVDGPDSKSGRLEVYHQGVWGTVCDDGFTDNAAAVVCRMLGFSTTYATQYQTFRISGTGQIWL DDVTCQGNEGNISECSHATWGTNNCGHGEDVGVSCARAGMTSESTGMTYSDTIISINPNDQTSPTLEGNTEKVMDEAKRR PFVEGRKRMKEERDREVERARLAQEDPESVVGEKKWTNILSDYGQKLKLIVVDEAHTVVQWGMESKTDEAFREMFSHIGE LRSVRPDIPFLALTATSAPTKRRKIMKSLCFKANAKVICESPDRSNI |
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