Gene
| Gene Model ID | pfu_aug2.0_663.1_11048 |
|---|---|
| Locus | scaffold663.1 : 1 ... 18118 : + |
| To GenomeBrowser | scaffold663.1:1..18118 |
| Genes list of scaffold | scaffold663.1 |
| Synonym | pfu_aug1.0_19240.1_54559 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_663.1_11048.t1 | 3 | 1 | LRR_4 | 39 | 54 | 1.0e-09 | 37.7 | 0.37 | 910.0 | -0.4 |
| pfu_aug2.0_663.1_11048.t1 | 3 | 2 | LRR_4 | 56 | 94 | 1.0e-09 | 37.7 | 4.8e-10 | 1.2e-06 | 28.0 |
| pfu_aug2.0_663.1_11048.t1 | 3 | 3 | LRR_4 | 99 | 123 | 1.0e-09 | 37.7 | 7.3e-06 | 0.018 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_663.1_11048.t1 | gi|291221565|ref|XP_002730787.1| | PREDICTED: dynein light chain 1, axonemal-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_663.1_11048.t1 | gi|524882566|ref|XP_005097925.1| | PREDICTED: dynein light chain 1, axonemal-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_663.1_11048.t1 | gi|560967465|ref|XP_006206113.1| | PREDICTED: dynein light chain 1, axonemal [Vicugna pacos] | 0.0 |
| pfu_aug2.0_663.1_11048.t1 | gi|676483891|ref|XP_009063169.1| | hypothetical protein LOTGIDRAFT_204565 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_663.1_11048.t1 | gi|530581693|ref|XP_005284708.1| | PREDICTED: dynein light chain 1, axonemal isoform X1 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_663.1_11048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11048.t1 gctgctaaaggcacaacaataaaggaggctatccaaaaatttgagcagaatgttccagagggaggtacctgtaagaaggc ctcagaagaaagtgaagttaggttgtttggacagatccctcctatagagaagatggatgcctccctatccactcttactt gctgccaaaaattaagcttgtctacaaactgtattgagaagattgcaaatctgaacgggctaaaaaatttgaaaattctg tccctgggaagaaacaatattaagtccctcactggtcttgaagctgtgggtgattcactggagcagctatggatttcata caacttaatagaaaaattaaagggcatcaatgttttgaaaaaattaaaatctgggaaaaaaaagaggttttttttaatgt attaccatatttttttgtttgttattgtctgtgttcctgtcaaatattaccttatcactattattgtaggtgttcctgtt atcagagatggggatgatgatgaggaaggtgattag |
|
Protein
| Protein ID | pfu_aug2.0_663.1_11048.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11048.t1 AAKGTTIKEAIQKFEQNVPEGGTCKKASEESEVRLFGQIPPIEKMDASLSTLTCCQKLSLSTNCIEKIANLNGLKNLKIL SLGRNNIKSLTGLEAVGDSLEQLWISYNLIEKLKGINVLKKLKSGKKKRFFLMYYHIFLFVIVCVPVKYYLITIIVGVPV IRDGDDDEEGD |
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