Gene
| Gene Model ID | pfu_aug2.0_663.1_11049 |
|---|---|
| Locus | scaffold663.1 : 24595 ... 45595 : - |
| To GenomeBrowser | scaffold663.1:24595..45595 |
| Genes list of scaffold | scaffold663.1 |
| Synonym | pfu_aug1.0_19240.1_54561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_663.1_11049.t1 | 4 | 1 | zf-C2H2 | 9 | 33 | 8.2e-10 | 38.4 | 0.00025 | 0.47 | 10.9 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 1 | zf-C2H2_4 | 9 | 34 | 2.8e-09 | 36.6 | 0.00011 | 0.2 | 12.0 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 1 | zf-C2H2_jaz | 16 | 30 | 1.0e-06 | 28.6 | 3.1 | 5700.0 | -2.4 |
| pfu_aug2.0_663.1_11049.t1 | 5 | 1 | ELM2 | 156 | 161 | 1.4e-10 | 41.6 | 8.0 | 15000.0 | -4.8 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 2 | zf-C2H2_4 | 285 | 306 | 2.8e-09 | 36.6 | 0.00051 | 0.95 | 9.9 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 2 | zf-C2H2 | 286 | 306 | 8.2e-10 | 38.4 | 6.1e-06 | 0.011 | 15.9 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 2 | zf-C2H2_jaz | 286 | 304 | 1.0e-06 | 28.6 | 9.3e-06 | 0.017 | 15.2 |
| pfu_aug2.0_663.1_11049.t1 | 5 | 2 | ELM2 | 427 | 446 | 1.4e-10 | 41.6 | 8.0 | 15000.0 | -14.9 |
| pfu_aug2.0_663.1_11049.t1 | 5 | 3 | ELM2 | 535 | 554 | 1.4e-10 | 41.6 | 6.1 | 11000.0 | -2.9 |
| pfu_aug2.0_663.1_11049.t1 | 5 | 4 | ELM2 | 1181 | 1235 | 1.4e-10 | 41.6 | 7.5e-14 | 1.4e-10 | 41.6 |
| pfu_aug2.0_663.1_11049.t1 | 5 | 5 | ELM2 | 1278 | 1305 | 1.4e-10 | 41.6 | 1.4 | 2600.0 | -0.9 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 3 | zf-C2H2 | 1435 | 1459 | 8.2e-10 | 38.4 | 9.1e-05 | 0.17 | 12.3 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 3 | zf-C2H2_4 | 1435 | 1459 | 2.8e-09 | 36.6 | 0.00066 | 1.2 | 9.6 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 3 | zf-C2H2_jaz | 1442 | 1456 | 1.0e-06 | 28.6 | 0.17 | 310.0 | 1.7 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 4 | zf-C2H2 | 1507 | 1529 | 8.2e-10 | 38.4 | 0.00039 | 0.72 | 10.3 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 4 | zf-C2H2_4 | 1507 | 1529 | 2.8e-09 | 36.6 | 3.6e-05 | 0.067 | 13.5 |
| pfu_aug2.0_663.1_11049.t1 | 4 | 4 | zf-C2H2_jaz | 1507 | 1530 | 1.0e-06 | 28.6 | 0.00015 | 0.28 | 11.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_663.1_11049.t1 | gi|524895336|ref|XP_005104153.1| | PREDICTED: uncharacterized protein LOC101864701 [Aplysia californica] | 0.0 |
| pfu_aug2.0_663.1_11049.t1 | gi|556982234|ref|XP_005997449.1| | PREDICTED: transcriptional-regulating factor 1 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_663.1_11049.t1 | gi|543246255|ref|XP_005416238.1| | PREDICTED: transcriptional-regulating factor 1 [Geospiza fortis] | 0.0 |
| pfu_aug2.0_663.1_11049.t1 | gi|683929823|ref|XP_009094689.1| | PREDICTED: transcriptional-regulating factor 1 [Serinus canaria] | 0.0 |
| pfu_aug2.0_663.1_11049.t1 | gi|542148267|ref|XP_005483119.1| | PREDICTED: transcriptional-regulating factor 1 isoform X3 [Zonotrichia albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_663.1_11049.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11049.t1 atgactcacagagacaagaagccgtatgaatgtacagtagagaattgccagaaaagctattgtgatgctcgttcactcag acgccacttggaaaaccatcacaaccaaaccccagaacaaatccaaagtgccattgccaaagtagcatcaaatgccgcgg cagtgatagcggcagcagctgcatcaaacaacgcctcgatcaaggccagtaacccctcctctgccacctccccatcctcc acacaagggcagcaacagcctgggacccaggggacaggtactgttcccactgcacagccacttaatagtgaaggccagca ggttgcgctgttgcttggtcaggacagcaacaccaataccgtgctgtctgagagctccactcctctgtcaagtcctagct acccagtacaatcacagcatcagttccagtacgatcaacaggtacaaccagcaactgtgataccacaggtacagatcagc aaccaacaaccagcacagcaacaacaacaaagccaacctgaaagggacctgcaacaattacaacaagctatgacatcagg atatggacttgaagaacaaagaccccagactattaccatacagggattgtcccaacaaccagctcatgttcaacaggcct tccaagaaactctcaagaagtttggtcagcctgttgtaagtcaccagtctaacccccacagcccccgggtagaggaacca tcccctggatacagtccgatcagccctgtacccactcagaacctgggggtgatcccatctgtcagcccagcccatgtcag gcttcattctacatcaaataccactgacaagtctggggaagacaagacagttatttgtacaatatgtgacaggtccttca aaaatgtccaggctctcaatggtcatatgagattacacggtggctacttcaaaaaaactaatttgcatgatgtaaaagaa gaaaaaaagagcaagaagatgcctacaatccgtgagatggtacctccacaaccagtcattcatcaaccagcgataaccag taataaccaaccgttcctgtctaccacagaccaagtggaatcatcacaacaatctagacttaatgaaggactatacggtg gacagtcgctgcctataatatcgtctgtacccccagaatcgccccagggtgaagctgtacatcaggagaagatccaactt catcatgcacagcaacaagagcagcaacaaaagcaattgcaacttcagttgcagagagaacagcaacttcaggagcaaca ggctcaacttcagcagcaacataagcaacagcagctgcagcaacaacaagagcagaaaatacaacaggagcaacaaattc aaagccagatacagcaacaattacatcagctgcagttagagcaacttgcattggagcaacacctgcaggcacaacggcag caacaacatgaacaacagcaacatgtgctggtgaagcaagaacaacctcagatccagtacttacagcaacaacctggtag ccaagccaactctatgcctccttcccctcaggttccacagtcccctcacttacaaaggcaatcttccatagagtccacaa tgtatgactatcaacatagcaatccccatccaaatcaacaaactcagcagtatcaccccagcatacagcaggaaaactca caagatcataaccatcctcaattcacaagtcccataccaagcagcatggcaatccagttacaacaactggctcaaagaca ggaactgcagagacaggaacaggaactggctcagagacaggaacaggaaataattcaaaggcaggaacaggaacttgcac agagacaggaaattcaaagacaggaacaggaaatacttaaaagacaggaacaggaattagctcaaagacaggaaattcaa agacaggaacaggaactgattcagagacaattactgctaaaacaggaacaggaaattgctcaaagacaagagcaacttat tttgacttctagacaagagcaccctctgctgcagaatcaagtacaccagcctgaacaaggacagggacatattgtaggat cgagtaaccctggtcataatgtactacaatcttcagtgcatttacccacaacaacaagtgttacgatgaatacttaccaa cacctgacatccccaccccctacaaaccttacttcagtgtcggttcactctactataccaagtgcttttgctcaggctca gatttctaattttgctttacagaatccaacattgaaaaatgagatacagaccatacctgtgtcagccattgctgtacaga gactgattgatccatctatcatcacagctagtcctgtcaccattgtgtctaccacatcaagccaagaaatgactgtctct cagcttctaaataccttggagagcccagcaaactttacatcactacaaaattttctacctgtgaatacaaaacctagtgc tactcaaagtgctaatactataaataaaccagaagtagtaaatgtaggcaatcaacagatggaatctactgttgcttatg ctagtgataaaacaagtgaatcaagcagtgtatttcatagtataggttcaaaatctcaagactttgatctggatagtaga cttgatgatattaatgatatctacaaaaaggaactcagctcggcagctaccacagaaaacccctttacgtttcctccaat agacgttgatatgacagagcatatgaacaatgatgatggcgctgtgcaaaacggaaattctggtgtatctaaaacaattc aaagtcggcataaagaactgaaaagaagactttcattagggaatgaaatccagactgctcctattttaaatatgtctgtg tctccacctaaaacttgtgctaccacacttactaaacatactctatcaaatagtgcattctcagataatcgccaaaggat aagaagtaaatcgggggatgatttcaagtacttcagatcaaaaagtgaagaatattcattcatgagaccaaggagtagaa cggaagtttctccaatgaaatcaaaatctgtagaaaaatttacatgggagagaagtacaagttatttattgtccagatca gacggtgcccagcatagtcttggacagttcagaaatcctaacatgttaactggtcagccaaagataaggcgtaaacatag acctgctccgttatttattccacctcatagaggttttagtgggttccagagtaacctaaggtcaccgagagttcccccga atatggaggggcgtggtcacacaccacctccctatactcctccccctatgttgagtcctaacaggagtggatccgggctg ttctgctccatctcaggggtatggaagccggcattgacacctaaatctgcccctattacacctcgcagtagtttacttct atccagtaggagtaatagtgtcatagacgacagtgctatagaaccagtgaaaccagaagtggcatctgaagctccaccag aaactgacgttttacctcatgttaatattggttctcagtatcaggcggagattcccacttgtaacggatctatatctgag gctttgcgggcggagtccagagaagatctgttatgggatcctgctaatgtcgctgatttatctgatgaggatgtgcaata ctaccaagatctggcctgcagctctgcagtaaatggcaatggttttaatgtggaatatgctttacacatactcaatattt acaagggaaacatacagactgccatgttaaggttgatgagtggaaaggtgtcattacccaaggatcataccctcctgtcc tacacatatcaagagactgattcctggtccacagaggaaatagagagatatcaacaagctttatggaagtgtgacaaaga tttctatgctctttctaaagagatgggaaccaagtctgtcaaggaatgtgtacagttctattatttatggaagaaagtat gtcctgacgagcataaacgattacgactgatcaggcggcgcagggaacaggagaggttgtacaacctcaggtcaactcag cagcagcaacaaacaacccaagcaacatcacagcaacctcctgtacaggcagcagctcctcagtctgaggccgtcactaa ttatgaggaatttgatgagatggaatcagagtctggggcctcaacggaggtggaagaacaaaacgacaatgaaatggaag ataagatgtctgatgacaagatgtctacagcttcatcagtcagtgcctcacccacccctacatacacatgtagctaccca gactgtaatgcaacttttaactctaagcaaggtctaaatggtcatgtgagaattcacaagggagcgagtggtaacagagg aacagtacaagctaaaaccctcccctcaggggagattactggaccggggagaccagcatcaaaaccaaccagctttgcca acaggtcacccatgtatgatgactttggcaatgagattttcccttgtagattatgtggcagggtattcaccaaagtgaag agtcgcagtgcccacatgaagagccaccgtattattgacaatgataaaaacaaaaacaaagcagcggcagcagcagcagc ttcagtggctcaaaacaactttgaaatatcggtaaacaagtttcagggctcccctcaccggtga |
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Protein
| Protein ID | pfu_aug2.0_663.1_11049.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11049.t1 MTHRDKKPYECTVENCQKSYCDARSLRRHLENHHNQTPEQIQSAIAKVASNAAAVIAAAAASNNASIKASNPSSATSPSS TQGQQQPGTQGTGTVPTAQPLNSEGQQVALLLGQDSNTNTVLSESSTPLSSPSYPVQSQHQFQYDQQVQPATVIPQVQIS NQQPAQQQQQSQPERDLQQLQQAMTSGYGLEEQRPQTITIQGLSQQPAHVQQAFQETLKKFGQPVVSHQSNPHSPRVEEP SPGYSPISPVPTQNLGVIPSVSPAHVRLHSTSNTTDKSGEDKTVICTICDRSFKNVQALNGHMRLHGGYFKKTNLHDVKE EKKSKKMPTIREMVPPQPVIHQPAITSNNQPFLSTTDQVESSQQSRLNEGLYGGQSLPIISSVPPESPQGEAVHQEKIQL HHAQQQEQQQKQLQLQLQREQQLQEQQAQLQQQHKQQQLQQQQEQKIQQEQQIQSQIQQQLHQLQLEQLALEQHLQAQRQ QQHEQQQHVLVKQEQPQIQYLQQQPGSQANSMPPSPQVPQSPHLQRQSSIESTMYDYQHSNPHPNQQTQQYHPSIQQENS QDHNHPQFTSPIPSSMAIQLQQLAQRQELQRQEQELAQRQEQEIIQRQEQELAQRQEIQRQEQEILKRQEQELAQRQEIQ RQEQELIQRQLLLKQEQEIAQRQEQLILTSRQEHPLLQNQVHQPEQGQGHIVGSSNPGHNVLQSSVHLPTTTSVTMNTYQ HLTSPPPTNLTSVSVHSTIPSAFAQAQISNFALQNPTLKNEIQTIPVSAIAVQRLIDPSIITASPVTIVSTTSSQEMTVS QLLNTLESPANFTSLQNFLPVNTKPSATQSANTINKPEVVNVGNQQMESTVAYASDKTSESSSVFHSIGSKSQDFDLDSR LDDINDIYKKELSSAATTENPFTFPPIDVDMTEHMNNDDGAVQNGNSGVSKTIQSRHKELKRRLSLGNEIQTAPILNMSV SPPKTCATTLTKHTLSNSAFSDNRQRIRSKSGDDFKYFRSKSEEYSFMRPRSRTEVSPMKSKSVEKFTWERSTSYLLSRS DGAQHSLGQFRNPNMLTGQPKIRRKHRPAPLFIPPHRGFSGFQSNLRSPRVPPNMEGRGHTPPPYTPPPMLSPNRSGSGL FCSISGVWKPALTPKSAPITPRSSLLLSSRSNSVIDDSAIEPVKPEVASEAPPETDVLPHVNIGSQYQAEIPTCNGSISE ALRAESREDLLWDPANVADLSDEDVQYYQDLACSSAVNGNGFNVEYALHILNIYKGNIQTAMLRLMSGKVSLPKDHTLLS YTYQETDSWSTEEIERYQQALWKCDKDFYALSKEMGTKSVKECVQFYYLWKKVCPDEHKRLRLIRRRREQERLYNLRSTQ QQQQTTQATSQQPPVQAAAPQSEAVTNYEEFDEMESESGASTEVEEQNDNEMEDKMSDDKMSTASSVSASPTPTYTCSYP DCNATFNSKQGLNGHVRIHKGASGNRGTVQAKTLPSGEITGPGRPASKPTSFANRSPMYDDFGNEIFPCRLCGRVFTKVK SRSAHMKSHRIIDNDKNKNKAAAAAAASVAQNNFEISVNKFQGSPHR |
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