Gene
| Gene Model ID | pfu_aug2.0_663.1_11051 |
|---|---|
| Locus | scaffold663.1 : 48926 ... 76415 : + |
| To GenomeBrowser | scaffold663.1:48926..76415 |
| Genes list of scaffold | scaffold663.1 |
| Synonym | pfu_aug1.0_1345.1_29691 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atlastin- partial | GO:0003924 GO:0005525 GO:0006996 GO:0008152 GO:0010256 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_663.1_11051.t1 | 1 | 1 | GBP | 51 | 317 | 0.0 | 318.6 | 0.0 | 0.0 | 317.7 |
| pfu_aug2.0_663.1_11051.t1 | 1 | 1 | GBP_C | 325 | 445 | 2.2e-07 | 30.3 | 1.4e-10 | 4.1e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_663.1_11051.t1 | gi|524895338|ref|XP_005104154.1| | PREDICTED: atlastin-2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_663.1_11051.t1 | gi|524895340|ref|XP_005104155.1| | PREDICTED: atlastin-2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_663.1_11051.t1 | gi|676483904|ref|XP_009063173.1| | hypothetical protein LOTGIDRAFT_167448 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_663.1_11051.t1 | gi|697035548|ref|XP_009580090.1| | PREDICTED: atlastin-2, partial [Fulmarus glacialis] | 0.0 |
| pfu_aug2.0_663.1_11051.t1 | gi|704266463|ref|XP_010152683.1| | PREDICTED: atlastin-2, partial [Eurypyga helias] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_663.1_11051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11051.t1 atggcgcacagtagcagtggtacacagatggatggagacagtcgaccttttgcttcctcagccaggatgcgtcccaaggg agagccagtacagattataagagcctccttcagccagcaagagggtgaggaggaggccaataccaaaacagtgtttgagt tagatgaggagaagctagagcagatcttactgaatccaaagattcaagataaaaaggtggtagttgtgtctgtggcaggc gccttcaggaagggaaaatctttccttctggattttttcctcagatatctagatgctaagggtcacccagattggcttgg tgatgatgagtcgccattagagggctttacatggcgaggcggcagtgaaagggaaacaaccggtattttactttggagtg agccattctttgttaagcttcctaggggagatgaggttgttgtgttactgatggacacacaaggtgcttttgacagtgaa tccacagtgagagactgtgccactgtgtttgctctcagtaccatgatcagctcagtgcaggtcttcaacattacacagaa tgtacaagaagatgatttacaacatcttcagcttttcacagagtatggtcgacttgccctggaggataatgataatgaat ccaaaccttttcagtttctgttatttttggtccgagattggagttttccgtatgaagctgaatatggagcagctgggggt agaaagcttctagagaaaagactgaaggtatcagacaaacaacataaggaattaaagcagataagagagcacatacgttc ttgttttgagaacattggttgcttcctgatgccacatccaggtcttagagtcgctaccaacccacactttgatggaaaac ttaaagacatagaaaatgactttaaagagcaggttaaggttctagtgccttatcttcttgatgaatccaacctggtcgta aaggaaattaacggtgccgaggtcacatgcagggaattagtggaatacttcaaggcttacattaaaatctatcagggaga tgaactgccagaacccaaatccatgttacaggcaacagctgaggccaacaacttggcggccgtctcaagctcaaaaagtc tgtactccagactgatggaagaggtctgcggtggagagaaaccatatcttcaccctgagcatctggatacagagcatcag aaatgtcgacaaaagtgtgtagacactttctgttctacacgcaaaatgggaggatcccagttcagtaaacagtatcagga gcaactagaaaccgaaattgacgaactctacgagaacttcaaaaaacataacgagggcaaaaacattttcgtctcggcaa gaactccggcggttttattcactgtgatggccatagcatatatattttccggtgtgtttggactggttggggcagagtca tttgctaatttattgaatgtaattctggtactgtttttagtgttgttatgcacgtggatttatgtcagatatagcggtga gcacagaggtgtgggacaaaccatcgatcaaatagcggaaaccatatgggataaggctttgaaccaggcttatactcaag tgatgcaacatgcagcaaaacagactattcaacacgccnttttgacatctttttcatttaatgttatacaaacatgccta taa |
|
Protein
| Protein ID | pfu_aug2.0_663.1_11051.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11051.t1 MAHSSSGTQMDGDSRPFASSARMRPKGEPVQIIRASFSQQEGEEEANTKTVFELDEEKLEQILLNPKIQDKKVVVVSVAG AFRKGKSFLLDFFLRYLDAKGHPDWLGDDESPLEGFTWRGGSERETTGILLWSEPFFVKLPRGDEVVVLLMDTQGAFDSE STVRDCATVFALSTMISSVQVFNITQNVQEDDLQHLQLFTEYGRLALEDNDNESKPFQFLLFLVRDWSFPYEAEYGAAGG RKLLEKRLKVSDKQHKELKQIREHIRSCFENIGCFLMPHPGLRVATNPHFDGKLKDIENDFKEQVKVLVPYLLDESNLVV KEINGAEVTCRELVEYFKAYIKIYQGDELPEPKSMLQATAEANNLAAVSSSKSLYSRLMEEVCGGEKPYLHPEHLDTEHQ KCRQKCVDTFCSTRKMGGSQFSKQYQEQLETEIDELYENFKKHNEGKNIFVSARTPAVLFTVMAIAYIFSGVFGLVGAES FANLLNVILVLFLVLLCTWIYVRYSGEHRGVGQTIDQIAETIWDKALNQAYTQVMQHAAKQTIQHAXLTSFSFNVIQTCL |
|