Gene
| Gene Model ID | pfu_aug2.0_663.1_11053 |
|---|---|
| Locus | scaffold663.1 : 94076 ... 108847 : + |
| To GenomeBrowser | scaffold663.1:94076..108847 |
| Genes list of scaffold | scaffold663.1 |
| Synonym | pfu_aug1.0_1345.1_29692 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase 2a 56 kda regulatory subunit gamma isoform-like isoform x3 | GO:0000159 GO:0007165 GO:0008601 GO:0050790 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_663.1_11053.t1 | 2 | 1 | B56 | 4 | 63 | 6.1e-35 | 120.6 | 3.5e-26 | 5.2e-22 | 78.0 |
| pfu_aug2.0_663.1_11053.t1 | 2 | 2 | B56 | 63 | 104 | 6.1e-35 | 120.6 | 1.2e-16 | 1.8e-12 | 46.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_663.1_11053.t1 | gi|524928181|ref|XP_005068307.1| | PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_663.1_11053.t1 | gi|640811304|ref|XP_008062264.1| | PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X3 [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_663.1_11053.t1 | gi|571538309|ref|XP_006559896.1| | PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X3 [Apis mellifera] | 0.0 |
| pfu_aug2.0_663.1_11053.t1 | gi|380030603|ref|XP_003698933.1| | PREDICTED: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 [Apis florea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_663.1_11053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11053.t1 atggttttgctgtattatttcagtataattaatggttttgccctaccactgaaagaggagcacaaagtgttcttgttgaa ggttttgttgccgttacataaagtgaagtcattgagcgtgtaccacccacagctggcctattgtgtggtacagttcctgg agaaggacccaagtctaactgaaccggtgatgttcctgaatgagttagaggagattcttgatgtgatagaacctgcagag ttcacaaaggtcatgtgtccattgttcaaacaattagcaaagtgtgtgtccagtccacatttccagtacaagcagtttgc aactctggcaaactccgagagacttggaaatccgacaactcctaatagtttaaacgatgactcagacgatgttatggtta attttgagaaattagaaaaagaagccagtgagctcacaaagaaaagggggaaagacaaaccacttctacggcgaaagtct gagttaccacatgacacaagtatgataagggccttagaaagccacaaacgtactgaggaatttctgactacctccacaga aaattcatttgcgaatacatag |
|
Protein
| Protein ID | pfu_aug2.0_663.1_11053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11053.t1 MVLLYYFSIINGFALPLKEEHKVFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDPSLTEPVMFLNELEEILDVIEPAE FTKVMCPLFKQLAKCVSSPHFQYKQFATLANSERLGNPTTPNSLNDDSDDVMVNFEKLEKEASELTKKRGKDKPLLRRKS ELPHDTSMIRALESHKRTEEFLTTSTENSFANT |
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