Gene
| Gene Model ID | pfu_aug2.0_663.1_11060 |
|---|---|
| Locus | scaffold663.1 : 222318 ... 234874 : - |
| To GenomeBrowser | scaffold663.1:222318..234874 |
| Genes list of scaffold | scaffold663.1 |
| Synonym | pfu_aug1.0_227.1_00199 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_663.1_11060.t1 | 1 | 1 | Cupin_8 | 193 | 376 | 1.6e-10 | 40.9 | 1.3e-13 | 3.8e-10 | 39.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_663.1_11060.t1 | gi|585714848|ref|XP_006812940.1| | PREDICTED: uncharacterized protein LOC102807379 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_663.1_11060.t1 | gi|676467175|ref|XP_009057804.1| | hypothetical protein LOTGIDRAFT_70151, partial [Lottia gigantea] | 3.0e-39 |
| pfu_aug2.0_663.1_11060.t1 | gi|548460767|ref|XP_005747775.1| | PREDICTED: jmjC domain-containing protein 8-like [Pundamilia nyererei] | 1.0e-26 |
| pfu_aug2.0_663.1_11060.t1 | gi|507632481|ref|XP_004628187.1| | PREDICTED: jmjC domain-containing protein 8 [Octodon degus] | 4.0e-26 |
| pfu_aug2.0_663.1_11060.t1 | gi|554876345|ref|XP_005948050.1| | PREDICTED: jmjC domain-containing protein 8-like [Haplochromis burtoni] | 5.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_663.1_11060.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11060.t1 atgccatcggccccgctactgaaagtacgaaccaccgggagaagctgtaagcgtcgggcttcgccactgacatcaagtta tggtaacggcgcctcggatatgccgaatggcacgcagagaaacatttctgtttatacgatgccaaagaaaggtaaaggaa atgcttctgtcagtaatggaactgcaacatccactaaatcacacaagaaagaatccaatggagtaattcatggtaaaacc ggcaaaaacaagaaacaggagagtgcttcccctttactactccaaataagtgctgctgtactagtcataattatagctgt agtgttcatacaaacggacttccttaaatttctggggagcaaagacaaagctgcagtaaatagtagaaatgataaaccgt ccgatcaaaatagtgcctcaaatgcagcgtcaaagacagagaaaaaagagacaaaaaagtggagaaaagctagtcaatca gacattaaaagatttggatctcagatatgtaatatagatagggtggatgctcagacactcacaaaagataggtttgaaga ggaatataggtttccaaacggtgccaaagactggactaatcctaagaagtggactttaaatagtctcaagcgtgaatacg gattatggtcggtattgtccggtaattctcgggaaatagtccggagaggaggcaatggggacgtacagacatccttcacg gagtacgtggaccgactgatggacaataaggatgaaggtggtgaaccattctacatattcgacagagccttttacaatga ttctagtcttccaagaacgctcaagccaccaaagtattttcaaattaaagatgggatcgatgacagtattttcttcctag gggcgtcaggtagtggcgtcactttccacaagcacgcggacgcgtggaatggcgtcatttacggacagaaacgatggttc ctttacccctcatcacacactccacctggcggtgtgtatccaggttttactcaaatagagtggtatgacatagtttatcc aaatctggcggaggaagaccagccaatggaatgtatacaacaagctggggaaatactctacttgccagaaggtacatatc atggaacaatcaaccttggggatactgtggccataggaatacagaaaaaggacgctaccatagaaacagaaaagttattt tatgatgagcttcaagtcgaacgtcagtacagagacaacagggttacattgctccaaaagaaagtggagatttacgaaag gttgttagaactcttaccggtttga |
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Protein
| Protein ID | pfu_aug2.0_663.1_11060.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11060.t1 MPSAPLLKVRTTGRSCKRRASPLTSSYGNGASDMPNGTQRNISVYTMPKKGKGNASVSNGTATSTKSHKKESNGVIHGKT GKNKKQESASPLLLQISAAVLVIIIAVVFIQTDFLKFLGSKDKAAVNSRNDKPSDQNSASNAASKTEKKETKKWRKASQS DIKRFGSQICNIDRVDAQTLTKDRFEEEYRFPNGAKDWTNPKKWTLNSLKREYGLWSVLSGNSREIVRRGGNGDVQTSFT EYVDRLMDNKDEGGEPFYIFDRAFYNDSSLPRTLKPPKYFQIKDGIDDSIFFLGASGSGVTFHKHADAWNGVIYGQKRWF LYPSSHTPPGGVYPGFTQIEWYDIVYPNLAEEDQPMECIQQAGEILYLPEGTYHGTINLGDTVAIGIQKKDATIETEKLF YDELQVERQYRDNRVTLLQKKVEIYERLLELLPV |
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