Gene
| Gene Model ID | pfu_aug2.0_663.1_11061 |
|---|---|
| Locus | scaffold663.1 : 246716 ... 248574 : - |
| To GenomeBrowser | scaffold663.1:246716..248574 |
| Genes list of scaffold | scaffold663.1 |
| Synonym | pfu_aug1.0_58842.1_05648 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_663.1_11061.t1 | 2 | 1 | zf-B_box | 16 | 58 | 7.0e-13 | 48.2 | 7.0e-07 | 0.0013 | 18.5 |
| pfu_aug2.0_663.1_11061.t1 | 2 | 2 | zf-B_box | 74 | 111 | 7.0e-13 | 48.2 | 8.5e-12 | 1.6e-08 | 34.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_663.1_11061.t1 | gi|195400733|ref|XP_002058970.1| | GJ15250 [Drosophila virilis] | 5.0e-12 |
| pfu_aug2.0_663.1_11061.t1 | gi|195047772|ref|XP_001992410.1| | GH24221 [Drosophila grimshawi] | 1.0e-11 |
| pfu_aug2.0_663.1_11061.t1 | gi|195131277|ref|XP_002010077.1| | GI15721 [Drosophila mojavensis] | 2.0e-11 |
| pfu_aug2.0_663.1_11061.t1 | gi|195355021|ref|XP_002043992.1| | GM13725 [Drosophila sechellia] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_663.1_11061.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11061.t1 atgagtgatgatggtgcctcagcctatcctactcagttagctgtctcatgtggcttctgtggcaccactgatgatataag gtggttctgtaagtggtgccccggatctttgtgtaacagctgtaaagactcacaccttaccatcctcttgttcaagaacc acaccgttgttcctcgcaccaatgaagtcgtgaggttgtacggtccatcaaaaattgcagagcaatgccaaactcatctt gacaaggagatatcaacatactgcaacgaatgtcaagttccctgttgtgttatatgtcttgtacaggctcataagggaca tgattttgcttccatcgaagacgcgtacctttccgctgagaaaagactgaatgataatgtcaaggaactagagaaagatg tcctgccgagtttggaaagcgttgcgggtaagattaagaaggacagatcagataatagagtccggattgacagtgtcaag atggagataaatgccttcagaaaagagatgaagcaagtagttgatgaatcatgcgacgatcttttagagaaacttgataa aaatgacatcgaattagatggccttatcacagaaatagaaaatcaaataggcaaaatcagggtattgataggagaaatag atagaattatacaaaagggtgacttagcaatgataaagtacttcccacctgctgtaagcaccatgatccccgatgttccc ataccgaaattacttactcctattttttctccaaggaaagatcttttgaccatattaggaaaaaggatagggaccttaac atggactgatgactgttctgatacaaaatgtgccccatcttcttcctcatctaaagcatcaaatatatgtatatcaaaaa taaatattcctaaggtaatttcctttagctgtgaaatcggggttacatccatcactatagctggtaacaacaaagcatgg atcatgtataatagtagtgataccatgtatctgtatgactcacgtggtgaggtggtaaagtctatcgtagtgaagaattg taaaggcattaatgacatggcaataacaagatctgaggagatgatcgtgacttgttgggataaggaagtgagacatctct ctaaggatggtcaggtgcttactctaataaatgctgagccatttgagccatcgggtgtttgccttatcgacgaggataga ctagttgtgtgtatgagagatcagaacatggcgaatcacctggcagtattctctttaagtacaggagggaagatatgcaa gatacgaggaatcgatggtcagggtaaacaacatatcacagacccttatcgtgtagtacaaaatggcgacgacatatgcg tggttaattatcgaagtgatatagtgtgtgtggacaataggggagttgtgaggtgggtgtatgatgatacgccgaacaat attggaggatcgtttgatccatgcggtataagtgtggacaacttccataacttactcatcactgatgtttacaataacag tgttcttatcatcgacagtgacggaaggttgatcaagattatacaagatgtagaaggattggtttgtccctggggaatct gtgtagatgatgaaacaaaccaagtttggattggaaatacaagtaacgatgttttaatcactaggtatttatcatga |
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Protein
| Protein ID | pfu_aug2.0_663.1_11061.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_663.1_11061.t1 MSDDGASAYPTQLAVSCGFCGTTDDIRWFCKWCPGSLCNSCKDSHLTILLFKNHTVVPRTNEVVRLYGPSKIAEQCQTHL DKEISTYCNECQVPCCVICLVQAHKGHDFASIEDAYLSAEKRLNDNVKELEKDVLPSLESVAGKIKKDRSDNRVRIDSVK MEINAFRKEMKQVVDESCDDLLEKLDKNDIELDGLITEIENQIGKIRVLIGEIDRIIQKGDLAMIKYFPPAVSTMIPDVP IPKLLTPIFSPRKDLLTILGKRIGTLTWTDDCSDTKCAPSSSSSKASNICISKINIPKVISFSCEIGVTSITIAGNNKAW IMYNSSDTMYLYDSRGEVVKSIVVKNCKGINDMAITRSEEMIVTCWDKEVRHLSKDGQVLTLINAEPFEPSGVCLIDEDR LVVCMRDQNMANHLAVFSLSTGGKICKIRGIDGQGKQHITDPYRVVQNGDDICVVNYRSDIVCVDNRGVVRWVYDDTPNN IGGSFDPCGISVDNFHNLLITDVYNNSVLIIDSDGRLIKIIQDVEGLVCPWGICVDDETNQVWIGNTSNDVLITRYLS |
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