Gene
| Gene Model ID | pfu_aug2.0_666.1_21039 |
|---|---|
| Locus | scaffold666.1 : 213748 ... 215668 : + |
| To GenomeBrowser | scaffold666.1:213748..215668 |
| Genes list of scaffold | scaffold666.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein partial | GO:0043167 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_666.1_21039.t1 | 1 | 1 | YqaJ | 168 | 233 | 3.2e-06 | 27.2 | 1.5e-09 | 7.5e-06 | 25.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_666.1_21039.t1 | gi|449669166|ref|XP_004206956.1| | 2.0e-11 | |
| pfu_aug2.0_666.1_21039.t1 | gi|261289713|ref|XP_002604833.1| | hypothetical protein BRAFLDRAFT_119491 [Branchiostoma floridae] | 2.0e-10 |
| pfu_aug2.0_666.1_21039.t1 | gi|449663783|ref|XP_002163459.2| | 9.0e-09 | |
| pfu_aug2.0_666.1_21039.t1 | gi|260826872|ref|XP_002608389.1| | hypothetical protein BRAFLDRAFT_95397 [Branchiostoma floridae] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_666.1_21039.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_666.1_21039.t1 atggacgtggcgcatatgacgctggagtcgttcagactttggaccccaaattccctaaaggtttttctgtcaaagagggg caagtcaactgatggaacgtttgaggagttgtcggcaagggcattttgtgcatggaaggaaaacactccagttcagccca gtgcagaggattcagaggcacgacttcttgatgagtacagagcaaagcttcgattactcaatggcgaaatcataccagat ccatttaccctagagggtggatggcttggcgaaacaacgggattacccagttggccatcactgtacattatggacataaa atatatatacatgaatataaagaagggaaagcctataggtactttagctgtgactggcacaagcagagttacaaagttaa gaaattcaaaatgccgagactcttctgaaaaaatacaagttaatgaagaccaagtattgcagcttaaaaatgcaacaaag gaccaagcacattcagaactgtggaaagaacatagaaaagctagactaactgcaagcaattttaagcgcatatgtactcg tgtagttactttaaaaaaggacaagactgcaagctctgctgctcttgttcacagtttgatgggttataaagaagttcgac caacgaaggctatgaaacatggtaccatgctagagcctgtcgctaaaaaaagcgtatgtgcaagaaatgaaaaaaataca taa |
|
Protein
| Protein ID | pfu_aug2.0_666.1_21039.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_666.1_21039.t1 MDVAHMTLESFRLWTPNSLKVFLSKRGKSTDGTFEELSARAFCAWKENTPVQPSAEDSEARLLDEYRAKLRLLNGEIIPD PFTLEGGWLGETTGLPSWPSLYIMDIKYIYMNIKKGKPIGTLAVTGTSRVTKLRNSKCRDSSEKIQVNEDQVLQLKNATK DQAHSELWKEHRKARLTASNFKRICTRVVTLKKDKTASSAALVHSLMGYKEVRPTKAMKHGTMLEPVAKKSVCARNEKNT |
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