Gene
| Gene Model ID | pfu_aug2.0_666.1_21042 |
|---|---|
| Locus | scaffold666.1 : 240591 ... 247897 : - |
| To GenomeBrowser | scaffold666.1:240591..247897 |
| Genes list of scaffold | scaffold666.1 |
| Synonym | pfu_aug1.0_5106.1_38061 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ef-hand domain-containing protein 1 | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_666.1_21042.t1 | 4 | 1 | DUF1126 | 117 | 148 | 0.0 | 203.7 | 3.3e-19 | 8.3e-16 | 57.1 |
| pfu_aug2.0_666.1_21042.t1 | 4 | 2 | DUF1126 | 260 | 293 | 0.0 | 203.7 | 1.1e-15 | 2.8e-12 | 45.8 |
| pfu_aug2.0_666.1_21042.t1 | 4 | 3 | DUF1126 | 332 | 364 | 0.0 | 203.7 | 9.1e-14 | 2.2e-10 | 39.7 |
| pfu_aug2.0_666.1_21042.t1 | 4 | 4 | DUF1126 | 507 | 539 | 0.0 | 203.7 | 1.9e-19 | 4.7e-16 | 57.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_666.1_21042.t1 | gi|118344384|ref|NP_001072014.1| | EFHC1 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_666.1_21042.t1 | gi|156362587|ref|XP_001625857.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_666.1_21042.t1 | gi|676484201|ref|XP_009063270.1| | hypothetical protein LOTGIDRAFT_195429 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_666.1_21042.t1 | gi|524903779|ref|XP_005108082.1| | PREDICTED: EF-hand domain-containing protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_666.1_21042.t1 | gi|471414482|ref|XP_004388779.1| | PREDICTED: EF-hand domain-containing protein 1 [Trichechus manatus latirostris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_666.1_21042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_666.1_21042.t1 atggagggactgccgtttctccctgggaatagcttcagagatccgaccgtagggaaatatcacagaagtcattcactgaa ctacaagaatggttatgctgtacctaaactccctgaagttggtataggcggaaaaccaattgtttataaccaactgtctg aacaggaactcgacgagcttgcaaatttcaatccaactcttacatatgggcaagccaaacaggcccctccagaggacttt gtaccaggacatgtagcatgggacaagaaggttcttaaattcaatgcgtttttcaaacaaacagtccatgagtcaccaga tgaatattatagagtgcgtccagttgacattttctattatctggaagatgacagcatatctgtagtggaaccacatgtag aaaacagtggcatgcctcaaggaaaattgatcaagcgacagagactgccaaagaatgaccagggggataactggcattgg aaggacattaacaacggtgtcaatgttacgttctatggaaaaatctttcacattgtcaactgtgatgaatttacaaagaa tttcttggaaagtgagggtcttgatgtgaatccgtctgagggtctccctacagacccatacatagagagaaggaaagagg ctgccgcacttaggacgtacaacactccctcatcattcgacaaactcaaacaattcatggaactcgatcgtaaagtgcta agattctactgtgtatgggatgatagggacaacatgtttggtgaaatgagaccatttgttatacattattatttggtaga tgacacattagaggttcgcgaggttcataaagctaatgatggccgtgatcccttcccagttttgatcggcagacacaagg tccccaaggatagatacaaagtagaatcgtcattcccggctgtagtcatggaattatctgataatgaaattaaggaatat tatactcctaaagactttaagattggtgaaactgtcgtgtactatttggtagatgacacattagaggttcgcgaggttca taaagccaatgatggccgtgatcccttcccagttctgatcggcagacacaaggtccccaaggatagatacaaagtagaat cgtcattcccagctgtagtcatggaattatctgataacgaaattaaggaatattatactcctaaagactttaagattggt gaaactgtcgtggtttatggacgtcgtttccttctgtttgattgtgacaattttacaaaggcattttattaccatcattt tggtcagactgagttcaaccccgtagaagtcaacgagaaaatcagagacttgccaaagatggaaattcccccttacaacc actttggttcccttgaggactccctccagtcatgtctgtcactcattccacaacctcccaagaaagatttcatcaaaatg ttggaaaatgaccacaaggtcttgagatttgaagcaataatggattctgtgcgaccagaagacaatggtagaaggttcat catatcttaccgtctggctgacgacatgatgaccatctatgaaccacctgttaggaactctggcatcatcggaggaaaat tcctagagaggacgcgagtggcaaaacccggctgtccacctgaccaacctgtattctacggcccacaagacttttacatc ggtgctgtcatagacgtattcaaacacagatttgtcattatggatgccgatgaatatgtactgaaatacatggaggacca caaatcacaattcccagaacaaacaatccagaccctgagagaaagattaggacagaccaggcaggaaaaagaaatgataa agggtggacccatgaaggtcaggaggaatgatggtgaccttgatatcctggtgagacaagtaagagctcagctgaagaag attgccatcacggataagacgcgcgtagacgagatgttcctccgttataacaaagataggacaggatttattgatgccaa caatatgaggaatttatgccgtagtctacaactgccggtagatgatgatgttatcaatgctctgattgcacagtgtacta cagatccagagggcaagatctcattagaagatttcagaaaatttgtggaaagttcatga |
|
Protein
| Protein ID | pfu_aug2.0_666.1_21042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_666.1_21042.t1 MEGLPFLPGNSFRDPTVGKYHRSHSLNYKNGYAVPKLPEVGIGGKPIVYNQLSEQELDELANFNPTLTYGQAKQAPPEDF VPGHVAWDKKVLKFNAFFKQTVHESPDEYYRVRPVDIFYYLEDDSISVVEPHVENSGMPQGKLIKRQRLPKNDQGDNWHW KDINNGVNVTFYGKIFHIVNCDEFTKNFLESEGLDVNPSEGLPTDPYIERRKEAAALRTYNTPSSFDKLKQFMELDRKVL RFYCVWDDRDNMFGEMRPFVIHYYLVDDTLEVREVHKANDGRDPFPVLIGRHKVPKDRYKVESSFPAVVMELSDNEIKEY YTPKDFKIGETVVYYLVDDTLEVREVHKANDGRDPFPVLIGRHKVPKDRYKVESSFPAVVMELSDNEIKEYYTPKDFKIG ETVVVYGRRFLLFDCDNFTKAFYYHHFGQTEFNPVEVNEKIRDLPKMEIPPYNHFGSLEDSLQSCLSLIPQPPKKDFIKM LENDHKVLRFEAIMDSVRPEDNGRRFIISYRLADDMMTIYEPPVRNSGIIGGKFLERTRVAKPGCPPDQPVFYGPQDFYI GAVIDVFKHRFVIMDADEYVLKYMEDHKSQFPEQTIQTLRERLGQTRQEKEMIKGGPMKVRRNDGDLDILVRQVRAQLKK IAITDKTRVDEMFLRYNKDRTGFIDANNMRNLCRSLQLPVDDDVINALIAQCTTDPEGKISLEDFRKFVESS |
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