Gene
| Gene Model ID | pfu_aug2.0_67.1_23356 |
|---|---|
| Locus | scaffold67.1 : 31269 ... 48255 : - |
| To GenomeBrowser | scaffold67.1:31269..48255 |
| Genes list of scaffold | scaffold67.1 |
| Synonym | pfu_aug1.0_11321.1_53687 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_67.1_23356.t1 | 3 | 1 | IQ | 465 | 477 | 4.1e-06 | 25.9 | 0.012 | 28.0 | 4.7 |
| pfu_aug2.0_67.1_23356.t1 | 3 | 2 | IQ | 499 | 513 | 4.1e-06 | 25.9 | 0.003 | 7.4 | 6.5 |
| pfu_aug2.0_67.1_23356.t1 | 3 | 3 | IQ | 532 | 545 | 4.1e-06 | 25.9 | 5.8e-05 | 0.14 | 11.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_67.1_23356.t1 | gi|676496791|ref|XP_009067330.1| | hypothetical protein LOTGIDRAFT_170441 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_67.1_23356.t1 | gi|524889598|ref|XP_005101354.1| | PREDICTED: IQ domain-containing protein E-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_67.1_23356.t1 | gi|390366435|ref|XP_003731044.1| | 0.0 | |
| pfu_aug2.0_67.1_23356.t1 | gi|585694440|ref|XP_002739007.2| | PREDICTED: IQ domain-containing protein E-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_67.1_23356.t1 | gi|696980782|ref|XP_009559151.1| | PREDICTED: IQ domain-containing protein E [Cuculus canorus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_67.1_23356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23356.t1 atgaacgcagtcaaaaacagacaaacacttggtttatcaggaaacagacgtccagaaagccctcggcataaaacaccaac agaatactgggtagacacgctcagacgaacaggaataggtatcagtacagagagtactagtatgaactccttgtctgcca tgaggaaaaacaatgacatgaatatggcttacctaagtacatcatcttacctacgacaaatggctggcactgaaaaacct cgcaaatatgaaaatcctgcaaccaagccccctacaggaacacctgcttacaaatcacctgaggaatattatgatcaggt gcttgaacttaaaaagcaaattaagtccatgacacaagaaatttcttcattaagagcaaaagttaggaggacagaggaag acaacattaaaaaggagaaagaaattgggggtcttctagatccaacaaagaatgaagaaatgcgtagagcattgggtgac aagaaccctgattccggtgctgttatacaaagtcttaaacaaaaaatactcaaattagaaaaccaaatcagagataaaga gtctgcctttgcaaaacttcagagtgatatgaaaaccaccaaagtagaggaaatgaaagttcaactagaaatgtgttacc aggaaatagttcgtcttcagaactctagagagactggtctggataaatctgtcaggtcagggaaggaaagtggtgcaaaa gtcaaggctttaaaccaaaccatcatccgtctgaataaacaaaatgaagaacttcaaacggaaatccggtccctgaagga ggatttaaatagagaaattgacagcaaagatagaggactctcaagggactatgaagacatgaataggaaacaattacttg gtgctataaaagaacttgaaaggaaattagagaaagttagccgagcagggggagataatctatctatcacatcattagat aaagcagagaaaaggcaaattgtcaagggtaagctagatttaacaggcagtgtacaggatcgactggatcagttagatag gagagagacagagctattagaggaggtagagaaacagagaaagctcgtcaaacaactcaaagaggaaaaactaacaaaca gggaaaagatgaaggaatatgagaaattgataaatgagcagcagtctgagatagactatttgaacgagcgaggtggtaca ggacgacgtacttcccgagctcagacttcccccaggacacagactcctaaagcaaccacacccagaaccccctctggcag gagatcatcacgtcctcctagtgccaggcggacatctgtggacagtacagcatctgaacaaagacagagaaggttacagg aggaggaagaggttgaacgcttcagaaaggagcatgcagcaaagaggctccaacgaggctggaaatctcaccgaaaggaa caacaagaggcaagagaaaggcaagaattagcagaaaggcaccgagaagtgactgcagcacgtaaaattcagcgaagctg gaaatcccatcaaaaacacaaggaagaggaatatgaaaaagcaatgatcgaaaaagctgatcaattccgtcagaataaag ctgcaacaaaaattcagaaagcgtggaaagcgaaatctgagagagagaacgaattaaaatcacaaaaagagaaagaaatt gaagaacaagagcaaaaagccaaagaagaggaagcagctatgaatagctatgacatgagtgatattgatggcattttgcc tgcaaagctacagcatgaatggctaaagttgaagatttccgacagaatagagcagctagaaaaatccagaaggaatggac tggttatagatacagaaaacacgaaggagaattggacgatgctacggaactcatacaggcatcgctga |
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Protein
| Protein ID | pfu_aug2.0_67.1_23356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23356.t1 MNAVKNRQTLGLSGNRRPESPRHKTPTEYWVDTLRRTGIGISTESTSMNSLSAMRKNNDMNMAYLSTSSYLRQMAGTEKP RKYENPATKPPTGTPAYKSPEEYYDQVLELKKQIKSMTQEISSLRAKVRRTEEDNIKKEKEIGGLLDPTKNEEMRRALGD KNPDSGAVIQSLKQKILKLENQIRDKESAFAKLQSDMKTTKVEEMKVQLEMCYQEIVRLQNSRETGLDKSVRSGKESGAK VKALNQTIIRLNKQNEELQTEIRSLKEDLNREIDSKDRGLSRDYEDMNRKQLLGAIKELERKLEKVSRAGGDNLSITSLD KAEKRQIVKGKLDLTGSVQDRLDQLDRRETELLEEVEKQRKLVKQLKEEKLTNREKMKEYEKLINEQQSEIDYLNERGGT GRRTSRAQTSPRTQTPKATTPRTPSGRRSSRPPSARRTSVDSTASEQRQRRLQEEEEVERFRKEHAAKRLQRGWKSHRKE QQEARERQELAERHREVTAARKIQRSWKSHQKHKEEEYEKAMIEKADQFRQNKAATKIQKAWKAKSERENELKSQKEKEI EEQEQKAKEEEAAMNSYDMSDIDGILPAKLQHEWLKLKISDRIEQLEKSRRNGLVIDTENTKENWTMLRNSYRHR |
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