Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_67.1_23367
Locus scaffold67.1 : 195721 ... 198409 : -
To GenomeBrowser scaffold67.1:195721..198409
Genes list of scaffold scaffold67.1
Synonym pfu_aug1.0_2296.1_44321

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_67.1_23367.t1 1 1 Tmem26 5 289 0.0 292.9 0.0 0.0 292.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_67.1_23367.t1 gi|642924412|ref|XP_008194285.1| PREDICTED: transmembrane protein 26 [Tribolium castaneum] 0.0

Transcript
Transcript IDpfu_aug2.0_67.1_23367.t1
Definition-
>pfu_aug2.0_67.1_23367.t1
atggtattagtaatagatattttaaaagcgagtgtggttcggatttttctcttgatccacagcttcctggcagtatggag
agcttatagtcttaatgaagacagtcaaatgtggtggcttgccattgcggatgtggctctgttctttgaaggattgttta
ccatcacgtgtcggaaaggattggaatataaatggttttgtccatgtttcttcttctatctatgtggaactataccgtct
atctggttgctggagctagaccgccgtgaccgctatgtcgaagtggacaatacgctaaatagcacacttaccggtccgca
gctcactcaaatctatggggtgtctatcccagtggaccttccgcccgatacatgggtagtagtgattgaacagctgctac
tatactttatgataattggtcgatggctcttaccacgtgggaaaatttcaaggaacgaattgtcccagttattgtttgtc
ttcattgggatggcctccgatatcactgaactcttcacattgtttgacgagcaagaggtacgcgagagcgaaaaattaac
atacgccatcttaattatctggacaatcagcctactacagttctgttttgtattgaccgctactaagagcacaaagaaaa
ctagggtagtgctcagtaacttggatgccgatgacgcgcattccggaaaccgttgttccgcatgcgtgaccagcgaaata
tggagcattctggtagctatgtgcatgcaagatgtcccgttccttgtagtccgaatgtactctattgtaaaattcaagct
tattacgtacagtattatatttttcaccgctaagaacgtgcttgtgacgatgcttttgttgtacagacttgttgttatct
gtgagcataaaggtcaagatgatgacgaactcgaggaaaatgttgaagttgtcatcgatgacgcgaaacaacaatcacaa
agagagatccccgccatcacgaaatcctacaatggagtatcgaaaaggaaagtccatcctccgaagaaaggacatttgta
cagatacgcaagtaaattagggagtttgtga

Protein
Protein IDpfu_aug2.0_67.1_23367.t1
Definition-
>pfu_aug2.0_67.1_23367.t1
MVLVIDILKASVVRIFLLIHSFLAVWRAYSLNEDSQMWWLAIADVALFFEGLFTITCRKGLEYKWFCPCFFFYLCGTIPS
IWLLELDRRDRYVEVDNTLNSTLTGPQLTQIYGVSIPVDLPPDTWVVVIEQLLLYFMIIGRWLLPRGKISRNELSQLLFV
FIGMASDITELFTLFDEQEVRESEKLTYAILIIWTISLLQFCFVLTATKSTKKTRVVLSNLDADDAHSGNRCSACVTSEI
WSILVAMCMQDVPFLVVRMYSIVKFKLITYSIIFFTAKNVLVTMLLLYRLVVICEHKGQDDDELEENVEVVIDDAKQQSQ
REIPAITKSYNGVSKRKVHPPKKGHLYRYASKLGSL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495