Gene
| Gene Model ID | pfu_aug2.0_67.1_23368 |
|---|---|
| Locus | scaffold67.1 : 200710 ... 207262 : + |
| To GenomeBrowser | scaffold67.1:200710..207262 |
| Genes list of scaffold | scaffold67.1 |
| Synonym | pfu_aug1.0_39532.1_70321 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-10-like | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_67.1_23368.t1 | 1 | 1 | Neur_chan_LBD | 33 | 176 | 7.1e-28 | 97.2 | 2.2e-31 | 1.1e-27 | 96.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_67.1_23368.t1 | gi|390349169|ref|XP_788399.3| | 1.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_67.1_23368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23368.t1 atgactggtttagcttggactttatttatttggagtgctatagtttctatttcctcctcaaaagcagagtatgaccaaga gctactggacagatccaggatattcaaagaagttgtgaagaaccaggactacttgaccaatatcgaaccgaaacataaca ctgttgtcaaggtgtctttcacgatagtttcaataatagactttgacgtaataaagagccaacttcacgttaatggaata tttcgtacacgatggaatgataaaagacttaaatgggacaggtcaaactacggcgatgtagggaatattccagtaacttt aagagatgtatggaaacctgaaatatcattgttcaatacggtaggaaagtttgtattgtatgatagaaaccaagaaatat tggctggaattgtaagtagccatggagatgttcattatgcttctggaggagtgtttagtgtggcatgtgcaccggatgtg acctactttccttttgatgaacatgagtgctatttcacttttgtcctacttaattcaatttacttccttcatgaaagtaa tcccaacagtactataaaagatatggaatctttcgtggataagtcagcaatcagagtccgagacggtgagtggaaataca gagctggagacccatgcgttcgaaaaatagaaaactccaaaatctttgccgtttacttcccaataaagctcttacgaaga tggccgtttacattttgcaatatcttaattcctgtgttacttctaagtttcctgaatgtatgtgtatacctgattccaat agaggctgtgcctgagatgtctgaccccatgcctatattgagctacttccttgccttcaaaatgctgtacagttcttgta tcgcaatatctcttattattgtatcaaagatgtaccacagaccagtggacagaccgattccaaggagacacagacggcta gtacaaatagtcgagagtattgtgaactgcaaggatgtccaagtggacatcaaagagtcgtcatctaaaggaaacgagga agaggaaagggtaagctccaatgacacacaggagtctaagctatcccccgaggagaatgaagtccccttcttacagagag agcaagtcacgtggggtagagaagaaagaaggggatctccaacaatccttggtaacagtacccacagcaaaactccaaaa acaaatggaaaaacacagtgcagacgccaacagaatcaatctccaaacctcgatcttgctacgcgtcagacgtattcatc cgccaaagcaaatgtctctgccacagacaccaagaatcttgccattgtcacaaattga |
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Protein
| Protein ID | pfu_aug2.0_67.1_23368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23368.t1 MTGLAWTLFIWSAIVSISSSKAEYDQELLDRSRIFKEVVKNQDYLTNIEPKHNTVVKVSFTIVSIIDFDVIKSQLHVNGI FRTRWNDKRLKWDRSNYGDVGNIPVTLRDVWKPEISLFNTVGKFVLYDRNQEILAGIVSSHGDVHYASGGVFSVACAPDV TYFPFDEHECYFTFVLLNSIYFLHESNPNSTIKDMESFVDKSAIRVRDGEWKYRAGDPCVRKIENSKIFAVYFPIKLLRR WPFTFCNILIPVLLLSFLNVCVYLIPIEAVPEMSDPMPILSYFLAFKMLYSSCIAISLIIVSKMYHRPVDRPIPRRHRRL VQIVESIVNCKDVQVDIKESSSKGNEEEERVSSNDTQESKLSPEENEVPFLQREQVTWGREERRGSPTILGNSTHSKTPK TNGKTQCRRQQNQSPNLDLATRQTYSSAKANVSATDTKNLAIVTN |
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