Gene
| Gene Model ID | pfu_aug2.0_67.1_23370 |
|---|---|
| Locus | scaffold67.1 : 304299 ... 379196 : + |
| To GenomeBrowser | scaffold67.1:304299..379196 |
| Genes list of scaffold | scaffold67.1 |
| Synonym | pfu_aug1.0_3976.1_01586 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear receptor | GO:0005488 GO:0006351 GO:0016874 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_67.1_23370.t1 | 3 | 1 | PAS | 117 | 171 | 4.8e-09 | 36.0 | 2.0e-09 | 5.0e-06 | 26.2 |
| pfu_aug2.0_67.1_23370.t1 | 4 | 1 | PAS_11 | 124 | 169 | 5.9e-23 | 80.9 | 7.9e-05 | 0.2 | 11.6 |
| pfu_aug2.0_67.1_23370.t1 | 2 | 1 | PAS_9 | 125 | 173 | 1.5e-06 | 28.5 | 2.4e-07 | 0.00059 | 20.1 |
| pfu_aug2.0_67.1_23370.t1 | 2 | 1 | PAS_3 | 136 | 171 | 1.3e-08 | 34.8 | 0.00019 | 0.46 | 10.6 |
| pfu_aug2.0_67.1_23370.t1 | 4 | 2 | PAS_11 | 234 | 313 | 5.9e-23 | 80.9 | 8.5e-23 | 2.1e-19 | 69.5 |
| pfu_aug2.0_67.1_23370.t1 | 3 | 2 | PAS | 234 | 297 | 4.8e-09 | 36.0 | 0.0017 | 4.3 | 7.1 |
| pfu_aug2.0_67.1_23370.t1 | 2 | 2 | PAS_3 | 236 | 303 | 1.3e-08 | 34.8 | 7.4e-08 | 0.00018 | 21.5 |
| pfu_aug2.0_67.1_23370.t1 | 2 | 2 | PAS_9 | 237 | 300 | 1.5e-06 | 28.5 | 0.012 | 29.0 | 5.0 |
| pfu_aug2.0_67.1_23370.t1 | 4 | 3 | PAS_11 | 1313 | 1344 | 5.9e-23 | 80.9 | 5.6 | 14000.0 | -4.0 |
| pfu_aug2.0_67.1_23370.t1 | 3 | 3 | PAS | 1323 | 1346 | 4.8e-09 | 36.0 | 5.4 | 13000.0 | -4.1 |
| pfu_aug2.0_67.1_23370.t1 | 4 | 4 | PAS_11 | 1689 | 1748 | 5.9e-23 | 80.9 | 0.015 | 36.0 | 4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_67.1_23370.t1 | gi|676484204|ref|XP_009063271.1| | hypothetical protein LOTGIDRAFT_235614 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_67.1_23370.t1 | gi|241244650|ref|XP_002402360.1| | nuclear receptor coactivator, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_67.1_23370.t1 | gi|242019472|ref|XP_002430185.1| | Neuronal PAS domain-containing protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_67.1_23370.t1 | gi|585643270|ref|XP_006811320.1| | PREDICTED: nuclear receptor coactivator 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_67.1_23370.t1 | gi|642923145|ref|XP_008193629.1| | PREDICTED: nuclear receptor coactivator 1 isoform X8 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_67.1_23370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23370.t1 atgaaatgtatagaaatcaagaatttgcgtctggccaatcaaacttacacacttatgaacacgaaaagttatcaaagtac aataagaaacaaatgcctgcatgagcgtcgtcggcgtgacctggagaacgcctactttgaggaactggctgagctgatct ccgcgagtatcacggatatgagctcgttttctgtcaagcccgagaagtgtgcaatactccaggagagccttcaacaaatc aagcaactcaaacaagatcaagaccaaggatcctcagaggctgttcagcagagtcaggtctcgtcaagtaaacctgcccg gctggctaatgacgtcctaggaccactacttctggaggctttagatggtttcctatttgtggtaaacagccaggggaaaa ttgactttgtatcagagaatataactcagtacctgaaatatacacaggatgaactgattggaaaaagtgtttacaacata atccatgtaggtgaccatgcccaattcagcagtacccttcttcctatgtcattaagtagtgtaatccaatggccgacaga ttctggtgtagccaaaggcagatcgtttaattgtcgtatgcttattaaacctccttgaattgtgaatgaggagactacat cttttagacaatcacaaaataatgtttcatttaaatgtggaatcatccccagacatcacccttgtccagaattaaacgga cagaatatcaacgatttttgtcacgtgaatgacgcacaaacgctctacaggcattttcaagaagttttgaagtcaggctg taacacgagtggtgtatatcgcttcaaactacaggaaaatttatacgtgtatgtacagacgaggagtaaacattttcaaa acgcgaacaatggcgaaacagactttgttatgtccacgcattctattattcgtgaatgtgactccgatgtggaacttaaa ggatcagcctctactagtttgatgaaagctattgtggctcagtcaacgctagcaggaaatcaaagaagtcagaacgtttt aaatctgccgaatcccatggcgattctaaacgccgtgaatcagccccaggcttttatgcccggtgcgggcggcccgccga gcttattgggcggtcgtaataacgaggatttgagtgacaatatagacttcaatcaatcaaattgggactccttattagga gatataggtttaggaaataataacaattcaggaaatggaagtggcttagtggtgcatagtaacgggaatttaaacatgtc gggaggaatcgttacctcgtcaacctctaatttgtgggacagtatgtcacagcagctgagatcgtctgctcagcaacaac aaatcatgcggaacgtcatgaacatgcagcagaacgccgccaattccaacttaccttcaaattttccgcgcaataattcg tttgacggaagcggaggaggagggcagaaaagtccgggaattccccaaagccccgggatgcgcggatcaccgtttcagat gcccacttcccaacccagggggacgggctattctgggcagcgtagtcccggaagtgcagggattgctcagaatagaatgt ctccggccagtgctgtttatccctcccaaagaacgcccccgtctgcagggaaccttaatcaaacgggtagctggcgaggc ttacagcacccccagcgggagttcagcgtcccctccagccccgtcaccacagatcccctcgcagcgctacagaacatcgg cggaaacattcggcagtctccggggctcagcaattcagacttctcattccctgggagtagggcaagtgtggttgagaaac cgtcaaaactgagccaacttttggcgggaaatcctccgtcaactggcagtgacattttccagagcccatccgtggagtca gtagaatcaaaggagtggtcgaatgacaacatggtgatcaaatccccggcagatagcatgcaccaatctcccacccctgg gcctgggcagagccctcctgaaaaaccccagagcactactaatattgaagagaacgacttcaacaaaagtaagggaggta gtgatgacaataagaacgtcatcctgaaaaaactcctcagttctgaagaggacaatgaggcagcgcctacagagtcggtc ccagaaacggaggacatgacggaaatgaacgaagcagaggcgaaaaagccaccgaaccacctcctgaagcaactgctgag cgacaataagcgggcagccaaggaaaagtccaaggggtccacagataagggacaaagacctgaacttttgtcgatcttat tgaatgaagacgagactcctggatgcacctcagctcctgcggaaagcacaagtcaggagaatgatcccctatcaaggtca cggaatccgtcaggtcaacaagagccgcagtcctctactcatccaacctctacctcccagcctacaagtcatactatacc tacatcatatagctccccgagccctatggcagatcacaaaatctcctcaatcgatctcgacctggtaaaaaaatctacaa ccagcagtacctccaaacctcaacaactctccaacatagctgatcgacaacttgacaactttctccagatattgtgggag aaggacagtgacttggagtcacaagctccaaaaagacggaaactgtccggtgatgtagacagcacagaacgaaccgaaat ggacatgttaaatactagtcaacagtcccagcagaaagactccacacggcagaaaaatgttctgctggctcagttactgg ccaaacagactcccactgagcctgtagtgaacacgcgattaacggttaatccttgtgatatgccccaaaataaactcccg ccaaacttacaagagaggatgctaagattacagcccctcaacattaaaactctggcggagaggaatgatgagagaccggc atcgaaaatgaatagcatgccaggtctcggcctgtcaaattccaatcctagtatacccaatacttcaaaagataatatac cagtaaatagtataggtagtgctcacttaaatcaaactctgaacacagaggagaatatgaatgtgagcagtggtttgaac tttatgcagcctcaacaacagcagcagtcaaatccattgagtggtaataacgtttttagtaatgggaatagttcgataca gagcttgcttggtcaaggtatgaatgatgatatagacattggtgaccaagcaagtagtgatcaagctttgctcaacaaaa tactggaacaagctgctgatttgcaacgtgatatatcatcgggaaatatagtgtccactccgatgccagtgtcgaatatg agtcaaaatacgggtatattatctactcagggaggaggtggcggcatgagcgacgacgcccagttgttttctcagtttga gcaggttatatcggaagccaatttaagtattaacgatattgaaagtctaatcacgaataatccctcgtctcagcaaggtc agcatgtggtggaggacagggctgccatagaagccatacaaaaacagttaatgagtgaagaacccatggtgacagtgccc agtatgatggacacccagggcattcagcctggcgccatgaccatggccagaatgccacctcaagggcctgttcgacaaaa cagtttctccggtataagtggtcaggggctgaatcaggtgccaggagggatggatgtgcccctccctccccctcagatgt caccccatggaggccatcctaagtctgctccctcaccccaaggctttaatcaggcagcacttcaattcagcccacaggga ccccgccctgcaggaccacctgggtcccatgcgagtgccttacagagccggcagcagagaccagcgttccagtctgctgc ggtacaagtcagacagtccctgctacaacagcagaaactgaagcagatgagagaagtggagaaacaaagactggctcagc aacaggaaagacagagacagctgatgcagaggcagctcatcagccaaaagtatgttaagttctatcaacgctgtccaaag aatatggataattcccagttaccccccttccctgaaaatttagcagaactgatgaatagtgggaatgcacctaatgtcac attgcagcgtaatcagataccaggtccaatgtcgcccagattcggtcctggaatccaacaacaacaacatcctaatttga gtcagctgatagggcccaatcccccgcccccagcatctccgatctccccgcactttaaccagcaaccacctaaacagtgg aacatgagaaatcaacaaggcatgcagagccctatgggtattccacctaagtcaagtcagtacaatataaaccgtcatag atcgttatctggcggtactgtcaccagcggaaaccagagtagtcagttccagtttcccgagcagtttgggacggcttctg gtaacggacagatgatgatgtataatcaacagcaatccatgtaccaaaatagaataatgaggcagatgagtctaccacca ggtaaaataatctttagggattggttgataagaatctacaaagaacctgcttggatagatatggtgattggtcagtcaag tcagtacaatataaaccgtcatagatcgttatctggcggtactgtcaccagcggaaaccagagtagtcagttccagtttc ccgagcagtttgggacggcttctggtaacggacagatgatgatgtataatcaacagcaatccatgtaccaaaatagaata atgaggcagatgagtctaccaccaggaagaggttcaccccgtaccccggccagccccttcggtaatagcccggatcccct cctgatgtcccctcactcgtctatctcccccaacagctcaatgaggaaccctcaaacaagtcagatcagccctccttaca atcaggccagtatgtcatcaactaactatggtgtgccgggctctatgacgggcctcagtaatcagccaatcatgtcccag gcttccactggcggacagggataccaggactttgacatgcagcttgctgacttagaaaagtctgggttaggaatgggagg tggcaacacaacatctcagtatgtaaaacaagaaatacgtaatatatgtagtgccagatcggaccagaaacagttacaaa cacaacagtcaatgccgcagtctgcaggacagtcaatgtcacagtctctgccacagtccatgtcacagtcagggggccag tccttgccacaacctgggggccagtccatgccccaggctgcaggccagtccatgtcacagaacatgccacagtctggtgg tctgggccagtccatgtcacacagcatgccacagtctatgaactctgttcagtactcagtggcccagagtttacaacagc aacccagtccagctttacgaagccaaagttctacctatgattttgatgattcctcagaaataccaagtgatattatagaa gacatacaccaaatggaaaaagaacaccaaacacacgcagcttttgatattaacaacttcaaagaagacgacatcctaaa agttaaacgacaggaggccaaacatatatatgagcaattcagggctttagcaaacagggaaaaagaaattaccaccacca ctaccactgctcctttaacagagaatccagaaatcaaggcatccacattatttagaaatcagctgaccacccaaagggac gggtcacaatcaagtgccacgcccaatctcctccagaggttaacatctgtggagaaacaacaagtacaagttgtagccaa ggaacccaggggaaggaatgtttccattttcagtactggtgctgccagttaa |
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Protein
| Protein ID | pfu_aug2.0_67.1_23370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23370.t1 MKCIEIKNLRLANQTYTLMNTKSYQSTIRNKCLHERRRRDLENAYFEELAELISASITDMSSFSVKPEKCAILQESLQQI KQLKQDQDQGSSEAVQQSQVSSSKPARLANDVLGPLLLEALDGFLFVVNSQGKIDFVSENITQYLKYTQDELIGKSVYNI IHVGDHAQFSSTLLPMSLSSVIQWPTDSGVAKGRSFNCRMLIKPPXIVNEETTSFRQSQNNVSFKCGIIPRHHPCPELNG QNINDFCHVNDAQTLYRHFQEVLKSGCNTSGVYRFKLQENLYVYVQTRSKHFQNANNGETDFVMSTHSIIRECDSDVELK GSASTSLMKAIVAQSTLAGNQRSQNVLNLPNPMAILNAVNQPQAFMPGAGGPPSLLGGRNNEDLSDNIDFNQSNWDSLLG DIGLGNNNNSGNGSGLVVHSNGNLNMSGGIVTSSTSNLWDSMSQQLRSSAQQQQIMRNVMNMQQNAANSNLPSNFPRNNS FDGSGGGGQKSPGIPQSPGMRGSPFQMPTSQPRGTGYSGQRSPGSAGIAQNRMSPASAVYPSQRTPPSAGNLNQTGSWRG LQHPQREFSVPSSPVTTDPLAALQNIGGNIRQSPGLSNSDFSFPGSRASVVEKPSKLSQLLAGNPPSTGSDIFQSPSVES VESKEWSNDNMVIKSPADSMHQSPTPGPGQSPPEKPQSTTNIEENDFNKSKGGSDDNKNVILKKLLSSEEDNEAAPTESV PETEDMTEMNEAEAKKPPNHLLKQLLSDNKRAAKEKSKGSTDKGQRPELLSILLNEDETPGCTSAPAESTSQENDPLSRS RNPSGQQEPQSSTHPTSTSQPTSHTIPTSYSSPSPMADHKISSIDLDLVKKSTTSSTSKPQQLSNIADRQLDNFLQILWE KDSDLESQAPKRRKLSGDVDSTERTEMDMLNTSQQSQQKDSTRQKNVLLAQLLAKQTPTEPVVNTRLTVNPCDMPQNKLP PNLQERMLRLQPLNIKTLAERNDERPASKMNSMPGLGLSNSNPSIPNTSKDNIPVNSIGSAHLNQTLNTEENMNVSSGLN FMQPQQQQQSNPLSGNNVFSNGNSSIQSLLGQGMNDDIDIGDQASSDQALLNKILEQAADLQRDISSGNIVSTPMPVSNM SQNTGILSTQGGGGGMSDDAQLFSQFEQVISEANLSINDIESLITNNPSSQQGQHVVEDRAAIEAIQKQLMSEEPMVTVP SMMDTQGIQPGAMTMARMPPQGPVRQNSFSGISGQGLNQVPGGMDVPLPPPQMSPHGGHPKSAPSPQGFNQAALQFSPQG PRPAGPPGSHASALQSRQQRPAFQSAAVQVRQSLLQQQKLKQMREVEKQRLAQQQERQRQLMQRQLISQKYVKFYQRCPK NMDNSQLPPFPENLAELMNSGNAPNVTLQRNQIPGPMSPRFGPGIQQQQHPNLSQLIGPNPPPPASPISPHFNQQPPKQW NMRNQQGMQSPMGIPPKSSQYNINRHRSLSGGTVTSGNQSSQFQFPEQFGTASGNGQMMMYNQQQSMYQNRIMRQMSLPP GKIIFRDWLIRIYKEPAWIDMVIGQSSQYNINRHRSLSGGTVTSGNQSSQFQFPEQFGTASGNGQMMMYNQQQSMYQNRI MRQMSLPPGRGSPRTPASPFGNSPDPLLMSPHSSISPNSSMRNPQTSQISPPYNQASMSSTNYGVPGSMTGLSNQPIMSQ ASTGGQGYQDFDMQLADLEKSGLGMGGGNTTSQYVKQEIRNICSARSDQKQLQTQQSMPQSAGQSMSQSLPQSMSQSGGQ SLPQPGGQSMPQAAGQSMSQNMPQSGGLGQSMSHSMPQSMNSVQYSVAQSLQQQPSPALRSQSSTYDFDDSSEIPSDIIE DIHQMEKEHQTHAAFDINNFKEDDILKVKRQEAKHIYEQFRALANREKEITTTTTTAPLTENPEIKASTLFRNQLTTQRD GSQSSATPNLLQRLTSVEKQQVQVVAKEPRGRNVSIFSTGAAS |
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