Gene
| Gene Model ID | pfu_aug2.0_67.1_23375 |
|---|---|
| Locus | scaffold67.1 : 468906 ... 507228 : - |
| To GenomeBrowser | scaffold67.1:468906..507228 |
| Genes list of scaffold | scaffold67.1 |
| Synonym | pfu_aug1.0_199.1_36374 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_67.1_23375.t1 | 2 | 1 | Lectin_C | 140 | 276 | 6.5e-10 | 39.6 | 1.2e-11 | 6.0e-08 | 33.2 |
| pfu_aug2.0_67.1_23375.t1 | 2 | 2 | Lectin_C | 502 | 521 | 6.5e-10 | 39.6 | 1.7 | 8500.0 | -2.6 |
Transcript
| Transcript ID | pfu_aug2.0_67.1_23375.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23375.t1 atgtctgccgcacaggctgcatttaacttaggcgggccagttggcaatctttttgttggatttgctttgggtgttcttgt tggaacaaggattggcgatgaagacgaagaagaatgtacaccttgtgcatctgaagaaggtggtttgcagacggggactc taggaacgggaggtttagaattttcaagggaacctaatatcgaaaagcccagctctaactctggtgggttgaaaaatatt gatctaaatcccccacctgtcaccaagaccgtaaaaaaggaacctgttgttaaaaagccagttcccagtgatcccgaatt gaatgtgattgctagtatggttgatgggtgtttaccatgcgctgaaggatggctttactttcaaggaagctgttacaaac tcgtcattgaaacagagacagaacccttctgggatggtcaagctgactgcgctagacttggctccaaactagctcaacat gaaactaaggaagaggatgatttcataattcaaaagattaaagagattggttgtttccatggagctgttgcgacgggtgt tgcatgcaatcaggagacgctgactctccccgggcacctggtctcacttcttaagtttgttcattccgagttggaacagc acaacagtcatcccaaaccagagccatttgtgtggggtattgtggcaccacaaggtaccttggatctgcataaaaactgg gctggtccagaccccaataatccaccagggaacgagtactgtggtgcaatgcacaaaggaaaatggatcgacctaagctg tggttcccgcatccattacatttgtgaactagagtgtacaaagttacgccgcttggagagtatccttgtacaacaatatc tgaatagcaacaatatcttagttacgtccctcaggaagcattatgacgtcatgaatgtaaacaaatgtacagttcgtaaa gtcagacttgtaggatatgccgtgttttgggtcataataattatcattttgacttttactaaagctcctagaaatcatga aatcgacaactcgactttgagaaacaaattcaataaaaatacaactaaccgctatctgatatacacctgtcgcaaaacat gtgctggatttgcaaatagaatacggggaattatcacagtattccttttggccaaacggacaaatcgcaaatttggaatt ttggaagaaagcaagtgtggtttaacaaccttcttgaaacctgcatggtatgattggagaatcaattccgaagatctgaa aggtttgtcatcagtttaccacgatacaataattatggaaaagacaggcactgggaatgattataagaatagaaatgatt ttgtacaaaacttgaaagaagatgttgttttccttcagactaaccagaagcctcatatatctaactattctgagactatt aaaggaatttttgaggaactttttgtttttgatcccgatatagtacatgaactgaaggcattcaaggaaactagcatgga aaatgataaaactgtgtgtgctcatattaggataggaagtaatcccggattttccgacatacattcaaacaacattggaa gcatcagtgctctttgggaatttctctctcaatatgacatagatggatacgttatttacgttgcaagtgactcaaatgac gtcagagagtctgcgaaaagacgctttccaaaacgtttcattgacttaccaggaccagtcatccacattgatgaaagtaa agatgacagtgtatgttcgggatttagaaaagccacgatggattttttgtttctatctcaatgcaatgttctccttttga cttacagtagttttggttcaactgcggcgattttaaggggaaataaggaccatcaatattgttttcaaaatggccaggtt ttaccgtgcactgagtacaacttgaaatggcaacggaccagtcgaaatgaacttccgcttgatgacgtttga |
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Protein
| Protein ID | pfu_aug2.0_67.1_23375.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_67.1_23375.t1 MSAAQAAFNLGGPVGNLFVGFALGVLVGTRIGDEDEEECTPCASEEGGLQTGTLGTGGLEFSREPNIEKPSSNSGGLKNI DLNPPPVTKTVKKEPVVKKPVPSDPELNVIASMVDGCLPCAEGWLYFQGSCYKLVIETETEPFWDGQADCARLGSKLAQH ETKEEDDFIIQKIKEIGCFHGAVATGVACNQETLTLPGHLVSLLKFVHSELEQHNSHPKPEPFVWGIVAPQGTLDLHKNW AGPDPNNPPGNEYCGAMHKGKWIDLSCGSRIHYICELECTKLRRLESILVQQYLNSNNILVTSLRKHYDVMNVNKCTVRK VRLVGYAVFWVIIIIILTFTKAPRNHEIDNSTLRNKFNKNTTNRYLIYTCRKTCAGFANRIRGIITVFLLAKRTNRKFGI LEESKCGLTTFLKPAWYDWRINSEDLKGLSSVYHDTIIMEKTGTGNDYKNRNDFVQNLKEDVVFLQTNQKPHISNYSETI KGIFEELFVFDPDIVHELKAFKETSMENDKTVCAHIRIGSNPGFSDIHSNNIGSISALWEFLSQYDIDGYVIYVASDSND VRESAKRRFPKRFIDLPGPVIHIDESKDDSVCSGFRKATMDFLFLSQCNVLLLTYSSFGSTAAILRGNKDHQYCFQNGQV LPCTEYNLKWQRTSRNELPLDDV |
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