Gene
| Gene Model ID | pfu_aug2.0_670.1_01021 |
|---|---|
| Locus | scaffold670.1 : 22946 ... 33090 : + |
| To GenomeBrowser | scaffold670.1:22946..33090 |
| Genes list of scaffold | scaffold670.1 |
| Synonym | pfu_aug1.0_6602.1_45482 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_670.1_01021.t1 | 2 | 1 | SAM_1 | 20 | 65 | 3.3e-08 | 33.5 | 2.4e-11 | 1.2e-07 | 31.7 |
| pfu_aug2.0_670.1_01021.t1 | 3 | 1 | HECT | 265 | 328 | 4.5e-08 | 32.6 | 0.22 | 1100.0 | -1.6 |
| pfu_aug2.0_670.1_01021.t1 | 2 | 2 | SAM_1 | 388 | 400 | 3.3e-08 | 33.5 | 2.2 | 11000.0 | -3.4 |
| pfu_aug2.0_670.1_01021.t1 | 3 | 2 | HECT | 486 | 505 | 4.5e-08 | 32.6 | 0.75 | 3700.0 | -3.3 |
| pfu_aug2.0_670.1_01021.t1 | 3 | 3 | HECT | 608 | 658 | 4.5e-08 | 32.6 | 9.2e-12 | 4.5e-08 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_670.1_01021.t1 | gi|585699412|ref|XP_006822760.1| | PREDICTED: uncharacterized protein LOC102806255, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_670.1_01021.t1 | gi|585654817|ref|XP_006815367.1| | PREDICTED: uncharacterized protein LOC102808559, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_670.1_01021.t1 | gi|585703136|ref|XP_006823195.1| | PREDICTED: uncharacterized protein LOC102803471 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_670.1_01021.t1 | gi|156407069|ref|XP_001641367.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_670.1_01021.t1 | gi|585684318|ref|XP_006812556.1| | PREDICTED: uncharacterized protein LOC102805363 [Saccoglossus kowalevskii] | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_670.1_01021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01021.t1 atggcggggacgccacagttaccagatgccccagaagagagattattaaaagaatgtctaacagaactgggaataccaag tctgtttgaacgtttcaaacaagaaaatgttgatgccgaaatgattgattcactgtcggacgtagatttggtccgattag gtgtaaactcgataggacatcgccacaaattgcgtcagatggtcaaaacgaaagtagaagaaaatagagcgacagacgta gacacaagtagtaataacacaggtagacctaggggattggcacagacagtgttaaatgaacgttcagtcctgtttaatgt aggaagaaagagggccaatggaaaatcaactggtggtaattataccggtaaaaaacctaaactgaaagctgggtttaccc tgcaatttctctgtctagcatcaaaatcacagactgttgtccctaattcttcagagaaagaagtacttaacaatgcaggt cttggtcgcaagaagataagatttgacaaatgcgacagtcaaaaagatgtgtgtaaaagaatcatgtcagatgaactttt agatggaaatgaaactgaaggttttcctcagcttgaaaaagctggtggatttgaattactaagaagtgtgcaaaattgcc gggaactgaaacttattgattgtacttggtcagcaaaagaactgcaaaagaatgttaaccaacaatccacaatttacatt cgtcctattcaaaataacttgcccaccaagcccaaaatctgtgtcggcggaaacgcatcccatgatgatcaaggcactga agaatacaaaacaatttgtacatcatgtggacaagattttacaatgcgccagctgagggagcatctggatttgtgtgagg tagaaaaaaatactgttcagataaattcacagcagccagaacaaaatgttagtgaaacagttatttatatatttgatgaa agtaccaactatgaacacaatgaagtaaataacaataatagtgatgtgccagctgacatggcgtcagttgaaacaattga tattgatgcacagagagaagttgtacatgtactacaaggaaatgagtctaatatagatatagccctgaaagttgcaaact tctgcaaggagaaaaacgtaatggacccaatcgaaattttgaaaaagtttcaacaagaaatggtaacgggaaggaacctt gaaatttctaacccggctgagatgatcgaaggagatgtaaattttatccttattgacagagaaagtgtcctcagaacagg ctttgatgaaatttcttccatagatccaaaagaactgaggaaaactttagatgtccagttctacaatgagactgctgtgg acttcggagggcccaggaaggagttctttagacttattttggcggcaataaaggaaaagtattttgataatggcttgcgt gaactactttttgcagactacgaaatggttggcaaaatttttgccctaagtattcttcagaatgggaaaataccaacatt tatgggaccagatgtattgatggaagtttttgatggatcatcagagtcaaaaggcttatgcattaaatatctatgcagag ggttggatgcacttggactatacagtttgtgcaaggagctaccaagttttgtgcatttgttccaaaacacccatgtgacc ttaacatataaaagggtaacaaacatgctcacaccagagtttacagaggaagggagtaatggctatatgtatgaaaaagc agtatatgcagctttcttacgctatctcagagaagttgcaagtggacgacgaaattcaataacactagcgaaggtcctac agtttgtaacaggcgcagatgaagaacctgttctcggatttaggctgcatccatcaatattgtttcatgccactgattct gttttcatacctacagcaaatacttgtatcaattgtctcagactaccgagaccaactcaccaacagggtctaccagaaga ctctgttttatttgaaagctatgactatgcatttacaaacacatattatggattaaaatag |
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Protein
| Protein ID | pfu_aug2.0_670.1_01021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01021.t1 MAGTPQLPDAPEERLLKECLTELGIPSLFERFKQENVDAEMIDSLSDVDLVRLGVNSIGHRHKLRQMVKTKVEENRATDV DTSSNNTGRPRGLAQTVLNERSVLFNVGRKRANGKSTGGNYTGKKPKLKAGFTLQFLCLASKSQTVVPNSSEKEVLNNAG LGRKKIRFDKCDSQKDVCKRIMSDELLDGNETEGFPQLEKAGGFELLRSVQNCRELKLIDCTWSAKELQKNVNQQSTIYI RPIQNNLPTKPKICVGGNASHDDQGTEEYKTICTSCGQDFTMRQLREHLDLCEVEKNTVQINSQQPEQNVSETVIYIFDE STNYEHNEVNNNNSDVPADMASVETIDIDAQREVVHVLQGNESNIDIALKVANFCKEKNVMDPIEILKKFQQEMVTGRNL EISNPAEMIEGDVNFILIDRESVLRTGFDEISSIDPKELRKTLDVQFYNETAVDFGGPRKEFFRLILAAIKEKYFDNGLR ELLFADYEMVGKIFALSILQNGKIPTFMGPDVLMEVFDGSSESKGLCIKYLCRGLDALGLYSLCKELPSFVHLFQNTHVT LTYKRVTNMLTPEFTEEGSNGYMYEKAVYAAFLRYLREVASGRRNSITLAKVLQFVTGADEEPVLGFRLHPSILFHATDS VFIPTANTCINCLRLPRPTHQQGLPEDSVLFESYDYAFTNTYYGLK |
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