Gene
| Gene Model ID | pfu_aug2.0_670.1_01022 |
|---|---|
| Locus | scaffold670.1 : 34703 ... 44615 : - |
| To GenomeBrowser | scaffold670.1:34703..44615 |
| Genes list of scaffold | scaffold670.1 |
| Synonym | pfu_aug1.0_17853.1_11074 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_670.1_01022.t1 | 1 | 1 | DUF2450 | 188 | 342 | 6.3e-12 | 44.9 | 3.1e-15 | 1.1e-11 | 44.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_670.1_01022.t1 | gi|676485502|ref|XP_009063676.1| | hypothetical protein LOTGIDRAFT_229439 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_670.1_01022.t1 | gi|524897955|ref|XP_005105432.1| | PREDICTED: vacuolar protein sorting-associated protein 54-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_670.1_01022.t1 | gi|701324658|ref|XP_010020797.1| | PREDICTED: vacuolar protein sorting-associated protein 54-like, partial [Nestor notabilis] | 0.0 |
| pfu_aug2.0_670.1_01022.t1 | gi|694671147|ref|XP_009489363.1| | PREDICTED: vacuolar protein sorting-associated protein 54-like, partial [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_670.1_01022.t1 | gi|701400532|ref|XP_009968801.1| | PREDICTED: vacuolar protein sorting-associated protein 54-like, partial [Tyto alba] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_670.1_01022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01022.t1 atggtggatgacaacttgctgtatactggatttgaaaatgatgtcagagattcaaggaaaccatctgttgagaaatcttt gacaccaacaaattcagttccatcggtagtgcaagatcaacataaatggacggtttatgatgctaaagtcaatctaccag ctgctctgaatgatccactcagagtcaaaagggaaacagatttctttaccaagacgtggggtcaagaattttatgagaaa atgtacatacccgaatcaccatatcttcctgatatagatcgcagatactttgacaagtacaaacataggatatctaagag atacagaaagtatgtgcgttatacacagaagattgagcaagaatctcctggtggggaaaccttcctacaacagctagaga aaaacagagcagagctacaacaattgccaaagttattcatgctgccaaattttgacctggagaatacagacacatttaac gctgtttttccatggtctcaagtcgaagactccaaaaagaaatctgatcaaccatcatcaccaaagtcatccaaacttct acaagaaaagctaagtcattacttggacattgttgaagtacatattgccaagcagatatcaaccaaatctgacgctttct tccaagctgtgtcatctcatgatgtattacaggaacagatgttaaaaacatgccaagccatcaagcaacttagagataaa gtacattctatagatgaacaaatgactcaaggatcattaaagattctgaaattgtcccagacaagagctaattatgttag cctgcacaataagctgaagatgatggctactgtacatcagacccagcctacgatacagttacttctctccaccaatgagt ttgtgggagctcttgatcttatatccaccacccaggaggtcttatcacaagaactagcgggcgttcatagctttagacat cttggttcccagcttgcagagcttgagaagttgatagatacaatgttacaagatgactttgttaagtgtatctctacaga tcttaacagaccaatcacagatgtggaacccatcgctgaagaggtaccaattttcgtcattttcgtcagtgcctcccttg acgaaattacgtatcgacgaatataa |
|
Protein
| Protein ID | pfu_aug2.0_670.1_01022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01022.t1 MVDDNLLYTGFENDVRDSRKPSVEKSLTPTNSVPSVVQDQHKWTVYDAKVNLPAALNDPLRVKRETDFFTKTWGQEFYEK MYIPESPYLPDIDRRYFDKYKHRISKRYRKYVRYTQKIEQESPGGETFLQQLEKNRAELQQLPKLFMLPNFDLENTDTFN AVFPWSQVEDSKKKSDQPSSPKSSKLLQEKLSHYLDIVEVHIAKQISTKSDAFFQAVSSHDVLQEQMLKTCQAIKQLRDK VHSIDEQMTQGSLKILKLSQTRANYVSLHNKLKMMATVHQTQPTIQLLLSTNEFVGALDLISTTQEVLSQELAGVHSFRH LGSQLAELEKLIDTMLQDDFVKCISTDLNRPITDVEPIAEEVPIFVIFVSASLDEITYRRI |
|