Gene
| Gene Model ID | pfu_aug2.0_670.1_01023 |
|---|---|
| Locus | scaffold670.1 : 47843 ... 64005 : - |
| To GenomeBrowser | scaffold670.1:47843..64005 |
| Genes list of scaffold | scaffold670.1 |
| Synonym | pfu_aug1.0_9236.1_38883 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_670.1_01023.t1 | 2 | 1 | Myb_DNA-binding | 45 | 75 | 8.9e-07 | 28.8 | 7.4e-10 | 1.6e-06 | 28.0 |
| pfu_aug2.0_670.1_01023.t1 | 2 | 2 | Myb_DNA-binding | 189 | 198 | 8.9e-07 | 28.8 | 0.64 | 1400.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_670.1_01023.t1 | gi|676458860|ref|XP_009055114.1| | hypothetical protein LOTGIDRAFT_118822 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_670.1_01023.t1 | gi|585696021|ref|XP_006822132.1| | PREDICTED: transcriptional adapter 2-beta-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_670.1_01023.t1 | gi|585696025|ref|XP_006822133.1| | PREDICTED: transcriptional adapter 2-beta-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_670.1_01023.t1 | gi|301781808|ref|XP_002926320.1| | PREDICTED: transcriptional adapter 2-beta isoform X1 [Ailuropoda melanoleuca] | 0.0 |
| pfu_aug2.0_670.1_01023.t1 | gi|472353138|ref|XP_004396240.1| | PREDICTED: transcriptional adapter 2-beta [Odobenus rosmarus divergens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_670.1_01023.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01023.t1 atggaatctgaccagtgcagttattgccaaagtgaaatttccggctacagagttgtgtgctcagagtgccccgacattga actttgtttacagaatggcagtccagtcggtgcctttgaggttgctaaaatatggacgctctcagaggaaactatgttac ttgatgctgttgaacagtatggatttggaaattgggaagatgtagcaaatcatgtggagtcaaaaaatgctgaagtaatc accatcaaaacatcttttcacgcctataatctcaggtataccgagcatgacaatgatgcagaaactgtgataagtagctt agccaataactacgatgatgaagatattgacatagctgtaaaactcactcaggtggaaaaatacaggacaagattaaaag aaagggagagaaggaaaagactagcgagggaatataatcttatacaggcagctacttcattggccaagcagaagtcacaa acaccgggtcggaaaaaaggaaccaaagatgagagagaatttcaggagaaaatgaaagtattcgcacagtttagcatagc ggctgaacacgagaagttcctagaatgcacacaaaaggagagagaacttcgagcaaggataaaagaattattacactaca gaaataatggtattacaaaaatggaagatgtagaaaaatttgaagatgaaggctttagaagagaaaagaaaaaggaacag aaaaagaaaatgggcagctcctccccagcaaagagagggtcaatggtgtcaaaaaaggcaagcggcgtaatagaagaaaa attagatatacttatagacgacgacggtaagaattaa |
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Protein
| Protein ID | pfu_aug2.0_670.1_01023.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01023.t1 MESDQCSYCQSEISGYRVVCSECPDIELCLQNGSPVGAFEVAKIWTLSEETMLLDAVEQYGFGNWEDVANHVESKNAEVI TIKTSFHAYNLRYTEHDNDAETVISSLANNYDDEDIDIAVKLTQVEKYRTRLKERERRKRLAREYNLIQAATSLAKQKSQ TPGRKKGTKDEREFQEKMKVFAQFSIAAEHEKFLECTQKERELRARIKELLHYRNNGITKMEDVEKFEDEGFRREKKKEQ KKKMGSSSPAKRGSMVSKKASGVIEEKLDILIDDDGKN |
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