Gene
| Gene Model ID | pfu_aug2.0_670.1_01025 |
|---|---|
| Locus | scaffold670.1 : 82239 ... 105185 : - |
| To GenomeBrowser | scaffold670.1:82239..105185 |
| Genes list of scaffold | scaffold670.1 |
| Synonym | pfu_aug1.0_62579.1_05718 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bromodomain adjacent to zinc finger domain protein 1a isoform x1 | GO:0005515 GO:0006261 GO:0008623 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_670.1_01025.t1 | 3 | 1 | WAC_Acf1_DNA_bd | 22 | 122 | 6.5e-31 | 106.5 | 2.2e-34 | 6.5e-31 | 106.5 |
| pfu_aug2.0_670.1_01025.t1 | 3 | 2 | WAC_Acf1_DNA_bd | 330 | 345 | 6.5e-31 | 106.5 | 5.0 | 15000.0 | -4.3 |
| pfu_aug2.0_670.1_01025.t1 | 1 | 1 | DDT | 400 | 460 | 7.6e-11 | 41.6 | 7.4e-14 | 2.2e-10 | 40.1 |
| pfu_aug2.0_670.1_01025.t1 | 3 | 3 | WAC_Acf1_DNA_bd | 649 | 679 | 6.5e-31 | 106.5 | 3.7 | 11000.0 | -3.4 |
| pfu_aug2.0_670.1_01025.t1 | 1 | 1 | Bromodomain | 1247 | 1324 | 7.7e-20 | 70.6 | 7.7e-23 | 2.3e-19 | 69.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_670.1_01025.t1 | gi|524883976|ref|XP_005098613.1| | PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_670.1_01025.t1 | gi|676451730|ref|XP_009052801.1| | hypothetical protein LOTGIDRAFT_159848 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_670.1_01025.t1 | gi|694955760|ref|XP_009425948.1| | PREDICTED: bromodomain adjacent to zinc finger domain protein 1A isoform X5 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_670.1_01025.t1 | gi|260830473|ref|XP_002610185.1| | hypothetical protein BRAFLDRAFT_216893 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_670.1_01025.t1 | gi|281604112|ref|NP_001164039.1| | bromodomain adjacent to zinc finger domain, 1A [Rattus norvegicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_670.1_01025.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01025.t1 atgccgctactccgtcgacagccatttcaaagacaaaaaccaccgcccgatttggatccagatgaagaagtgtttcattg tcctcttacaaatgagatctttcgagactatgaggacttttttgagagaattatcctctgcaacagcctggtatggtcat gttccatcactggaaggtcaggtctcacctaccaagaagctgtggagtgtgaagaaaaagccttaaagaatctagcttcc ttcccaatctaccttcaaaaacccatgctgtttctagccactcttacacaccgaagtcgcctaaatgatctcaatgatga tatatttctctttgccaaagatagatatttcattggagaagttgtagatataacgttagggaatgagaggaaatcctgta aagttcttagagttattccaccagctattgtccctgaaaacacaggatgtatagttatagactctgatgaagaggagcaa agtaaagagaaaccaaaaggagctaattttaaagcagatacgtacaaatatgttgtgcaggagagaggaaaagctactaa catcacaattacggtgccggccaaacaagtctgtcgtaagaaaggtttatacaccagagacaagagtaaactatttttaa agcagtactgtgagactgataatggaatatggaaagtcaaggggagtataattaaaaagaaaggtctggaagaggcatgc tttgcagacttctttgctggtccacctcctgtgttcggggtatcggaaagtaaaagaaaatcatcgggaaagaagcatga ggaagaagaagatgactatggcaggatgctgtctccaagcaaaaggaaagatgataagaaaaagaagaaaatcaaggaag gaccattggaaaaggcaccatttgaaagagatgatgttatcaagctgacggctgaggaaagggccttaatcagtgaacag tacagacagcagaaaatggcagagagggctgcacaaaaggaggaactaaagaagaagaaagtagaggatatgttaaggag gaaagaagagagagcaaaggaaagagaacagaaaatggaggagaggaggaaacaaaatgaactgtacaaggaatggagta agatgagagatgatatggaatgtgatgatctcaaggtgatgccagaacctacgcccatcaaaaccaagattccagctgaa agcttcggagatgcagttatggttttggaattcatgaattgttttcggaatctaattgatttaaaagaatactttcccaa gggcttcacttttgaaatcttggagcaagcattactggacacagaccataatggcctgcttactgacatccttctgatga ttatgtcaactatatttactatgcaagaagaggaagaagctgaggaggaggctctgtccaaggaagataaggccaatcag atgactggtacagaagaaatagatgctgacatggatttagaggagctcatggatacagctacacagttcgcacaaatacc tcaactcactcatggaacactgctgagaaagctgccacttgactccttcaccctcactgagattgtacgtctacatattt tggcgtctggtgccaaagttagcgacaagaacgtaaagtaccgataccagcagagagggggatatacatcacaggatgat ccaggactcctgttcaagtgtaaagaaccaaccgtcatcagatcactagcaacagaaaatatatttgatatacctcctag tgataaacttaaaatcttaaacgtcctcatacaacagatcttgacttatgcttcaacaagagacaatgttgaagaaatgg gagaaaatgggactgtagatggggaaaggaaggatgatgaggaggaggaagatgatgatggggagatttctatgacggaa gaagagaaggaggaattaagacagcaggaggaagaagatgaagctaatcgtaaagcagaatttgccatgaaagagaaaaa aatgattttagatctcgccaaattacagcattcttgttctattgctcctctgggaagggatcgtctatacaggagatact gggttttccagtccttacctggtctatttatagaagatgatgaaaatcttgtgaaggaagaagcaaaaatcccaatcaat caaaacccactgtccaatcctttaactcctgaaatggctgctagaatgaaatctatgccagtctcaaaacctgcccagtc tgatagtgcgtctgcagtcaatggaggtagtgataaggaaaatgaatcatttaataactctacggctaataccagtatga atgtttctaccgctaacaatacacttaacacctctactgcagaaaatagcatcaatccctcggtcaataccagcttgaat acaagtcagttaagttctgcaaatacaagtctagtcaatggaattccaaatggatctcagaatgtcaaaattgaggaaaa aggaaaaattacaaatggaaacatcatttctgtaagtgatgacgaggacaacttatcaaaatcaagaaaagaaagtccaa aagttagttcattagaaaaagttaatcttgcagttcggcaaataattgaccgaccaagatgtgtttggtcatttctctct acccctgaggagtatgacgaattaatcagttctttgaatcccaggggatttagggaaagtgctctaaaaagtactcttct tgaacaaaagaatagaattgttgaaataattgacaaaactcctaatgatgttttgtgcccaaagatagaaaatgaaatca ttgaagaggagagggcgcggtcagaatcaccagcggaagtaggcattaagactagacataagaattctctgaagagagca tcaaaaggacttgtgaaaaacgagtgtgctcaggaaatactcgagatacatctacgggaaacattgctggattttgagga aagaatatttattggaggtcttggtgtattaaaggtgcacaatcgtcaagcatggagagaatccattgagagtggaagtt atgatccccagacagatgacccattgtttgcaaagtatgaaagaaccaaagtcaaagaagagagacaaactgaaagttca gaggaccaccaatcagaagcgaggaaaaaatgccagttagccagatctctggaggccaagtacctcctggtacctctagg agaaaatgaaaaacccaaaggaggaagaaaaagtgctgcagagctgagaaaagagaagaagaagagagaggaagaggaaa ggaagaaacaggaagaagaggagaggaaaaggagggaggctgaggagaatgatagcgatgaagaacaattacccatggcg gagaagattcctgagaagacaaccaaggagagatgggaggactctgtgttgtcctgtaccagccttcctcagctcttcct tcatatagagacgttagacaagagtatattctgggacaagtcggccttgcatgccaggtgagattggtattgccctgact gtagacccaaagaaaagaagcatagtcctctgaagaatagaaggaaaactttcacagaggaggaggaggaagagccaatg gaagaagaacaagaggaggaagataccagcagggaaatggaggaagatggatggctctttgattttcaagatgaacccaa gcactatgttagtagttcgcgaggtaacagtaaggtacagagcatgaagcagttacagggtgtggtacaggaactgatga agctagaggacagtgaaccattcctcaaacccgtcagcaaaaaactggtacctgactactatgacatcatagctatacct atggactttggcaccatcaaaaacaaaatcaacaactttgattacaatgatgtatcggaccttattacggatgtacggca aatcttctcaaactgtgccgaatataatcgaaaatcaacaccagagtttaaagctggtgcagcactttctaaaatcttcg aaaagagactaaaagacttgcatatagaagcagaaactcccccaccaaacaagaagcaaagacgacaatga |
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Protein
| Protein ID | pfu_aug2.0_670.1_01025.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01025.t1 MPLLRRQPFQRQKPPPDLDPDEEVFHCPLTNEIFRDYEDFFERIILCNSLVWSCSITGRSGLTYQEAVECEEKALKNLAS FPIYLQKPMLFLATLTHRSRLNDLNDDIFLFAKDRYFIGEVVDITLGNERKSCKVLRVIPPAIVPENTGCIVIDSDEEEQ SKEKPKGANFKADTYKYVVQERGKATNITITVPAKQVCRKKGLYTRDKSKLFLKQYCETDNGIWKVKGSIIKKKGLEEAC FADFFAGPPPVFGVSESKRKSSGKKHEEEEDDYGRMLSPSKRKDDKKKKKIKEGPLEKAPFERDDVIKLTAEERALISEQ YRQQKMAERAAQKEELKKKKVEDMLRRKEERAKEREQKMEERRKQNELYKEWSKMRDDMECDDLKVMPEPTPIKTKIPAE SFGDAVMVLEFMNCFRNLIDLKEYFPKGFTFEILEQALLDTDHNGLLTDILLMIMSTIFTMQEEEEAEEEALSKEDKANQ MTGTEEIDADMDLEELMDTATQFAQIPQLTHGTLLRKLPLDSFTLTEIVRLHILASGAKVSDKNVKYRYQQRGGYTSQDD PGLLFKCKEPTVIRSLATENIFDIPPSDKLKILNVLIQQILTYASTRDNVEEMGENGTVDGERKDDEEEEDDDGEISMTE EEKEELRQQEEEDEANRKAEFAMKEKKMILDLAKLQHSCSIAPLGRDRLYRRYWVFQSLPGLFIEDDENLVKEEAKIPIN QNPLSNPLTPEMAARMKSMPVSKPAQSDSASAVNGGSDKENESFNNSTANTSMNVSTANNTLNTSTAENSINPSVNTSLN TSQLSSANTSLVNGIPNGSQNVKIEEKGKITNGNIISVSDDEDNLSKSRKESPKVSSLEKVNLAVRQIIDRPRCVWSFLS TPEEYDELISSLNPRGFRESALKSTLLEQKNRIVEIIDKTPNDVLCPKIENEIIEEERARSESPAEVGIKTRHKNSLKRA SKGLVKNECAQEILEIHLRETLLDFEERIFIGGLGVLKVHNRQAWRESIESGSYDPQTDDPLFAKYERTKVKEERQTESS EDHQSEARKKCQLARSLEAKYLLVPLGENEKPKGGRKSAAELRKEKKKREEEERKKQEEEERKRREAEENDSDEEQLPMA EKIPEKTTKERWEDSVLSCTSLPQLFLHIETLDKSIFWDKSALHARXDWYCPDCRPKEKKHSPLKNRRKTFTEEEEEEPM EEEQEEEDTSREMEEDGWLFDFQDEPKHYVSSSRGNSKVQSMKQLQGVVQELMKLEDSEPFLKPVSKKLVPDYYDIIAIP MDFGTIKNKINNFDYNDVSDLITDVRQIFSNCAEYNRKSTPEFKAGAALSKIFEKRLKDLHIEAETPPPNKKQRRQ |
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