Gene
| Gene Model ID | pfu_aug2.0_670.1_01026 |
|---|---|
| Locus | scaffold670.1 : 115134 ... 127325 : - |
| To GenomeBrowser | scaffold670.1:115134..127325 |
| Genes list of scaffold | scaffold670.1 |
| Synonym | pfu_aug1.0_7099.1_52889 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_670.1_01026.t1 | 1 | 1 | Adap_comp_sub | 103 | 373 | 0.0 | 166.6 | 0.0 | 0.0 | 165.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_670.1_01026.t1 | gi|260831436|ref|XP_002610665.1| | hypothetical protein BRAFLDRAFT_117900 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_670.1_01026.t1 | gi|573878222|ref|XP_006627344.1| | PREDICTED: AP-4 complex subunit mu-1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_670.1_01026.t1 | gi|156360711|ref|XP_001625169.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_670.1_01026.t1 | gi|499009285|ref|XP_004556925.1| | PREDICTED: AP-4 complex subunit mu-1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_670.1_01026.t1 | gi|542260159|ref|XP_005465175.1| | PREDICTED: AP-4 complex subunit mu-1-like isoform X3 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_670.1_01026.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01026.t1 atgtacccaatgatacctgtgataccttcatcaggaagctacaggctactggaccatcaagtcttccacctcactttgtt gaaggagaaacatactactatcacattagaaggaacggtgttcacattgcagcaacaagactttggtctagttcagatag cagatacagataagttaaggccatacatacagtctgatcctatcctcgtcagatctggcagagaaccaacaagtgatcta acttccagaatgtttggaatagagaccaaagtgtcaccaagttctgcatccagcaaatcagttatatcatccaataaaag tgatgttccaactaatgaactgtttgttgacattatagagagacttacagcaagtataggaatcaatggtgctgtatcaa ggatggaagtaaatggaacgattaacgtcaaaaactttttgaaagggaatcctcagataaggattggactcaatgagaat ttgaaaataagaaaagaaggaaccataagagcatttggtgaacatgttgagttggattcctgcagttttcatccatgtgt caacaaacagagcttggacgatacagggtacatggcagtgtcgccacctattggtgaattttctcttatgacctacagtg tgtgtgatgccatgtccgtgaagattccttttcagctgcgaacatttgttgaaagtatccaaggaagcagggatgttaac ctgactctccgtctacaaagctgtttcccacatcagatgacggctatgggtgttaaattgaaagtcacagtacctgctgt cgtagacaacatatccaaacatttagattctgatgtaggacatgagcagtccgctgaattcaaacatagtgacagagaga tcatatggcaagtcaagtcatttcctggaaatactcaagttgtggctcattttaggttaatcaacaattcaaattctgtc atcagtaagagtgatataggaccatatggccttgactttgagatctcgggatattcatcaactggattgttaatcagaaa tgtcaaggtcatgtcaaaggacaagtctaaccccaagaaatggatcagatttattacagttagtgacaactacatcatca aaggctaa |
|
Protein
| Protein ID | pfu_aug2.0_670.1_01026.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_670.1_01026.t1 MYPMIPVIPSSGSYRLLDHQVFHLTLLKEKHTTITLEGTVFTLQQQDFGLVQIADTDKLRPYIQSDPILVRSGREPTSDL TSRMFGIETKVSPSSASSKSVISSNKSDVPTNELFVDIIERLTASIGINGAVSRMEVNGTINVKNFLKGNPQIRIGLNEN LKIRKEGTIRAFGEHVELDSCSFHPCVNKQSLDDTGYMAVSPPIGEFSLMTYSVCDAMSVKIPFQLRTFVESIQGSRDVN LTLRLQSCFPHQMTAMGVKLKVTVPAVVDNISKHLDSDVGHEQSAEFKHSDREIIWQVKSFPGNTQVVAHFRLINNSNSV ISKSDIGPYGLDFEISGYSSTGLLIRNVKVMSKDKSNPKKWIRFITVSDNYIIKG |
|