Gene
| Gene Model ID | pfu_aug2.0_671.1_04467 |
|---|---|
| Locus | scaffold671.1 : 130236 ... 130739 : + |
| To GenomeBrowser | scaffold671.1:130236..130739 |
| Genes list of scaffold | scaffold671.1 |
| Synonym | pfu_aug1.0_10345.1_39033 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_671.1_04467.t1 | 1 | 1 | C1q | 3 | 124 | 2.0e-22 | 79.5 | 2.9e-26 | 2.2e-22 | 79.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_671.1_04467.t1 | gi|657582494|ref|XP_008295308.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 3-like [Stegastes partitus] | 2.0e-12 |
| pfu_aug2.0_671.1_04467.t1 | gi|410932197|ref|XP_003979480.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 3-like [Takifugu rubripes] | 8.0e-12 |
| pfu_aug2.0_671.1_04467.t1 | gi|260801205|ref|XP_002595486.1| | hypothetical protein BRAFLDRAFT_118972 [Branchiostoma floridae] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_671.1_04467.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_671.1_04467.t1 atggtggctttcacagcttgccattcaccaggttctcttatcggtccccgacaaacagtcatctacgatcacattataac aaacatagggaatgcttacgatgtcagggatggagagttcaacgtgccatacgatggtctctatacattttctgtcacag gaatggcatacacagaaagtgatatgtatcttacattagtgaaaaatggcgtctacgttcatcagttgtatagtaattct ggatatgccgactcctctacctataccatgaatctttacctacaagccggtgatgcagtttgggtagtcaatagcggatc tagtgatcgacttcatgctaatgattataactgcttctcggggatgcttgtcaaggagaagtaa |
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Protein
| Protein ID | pfu_aug2.0_671.1_04467.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_671.1_04467.t1 MVAFTACHSPGSLIGPRQTVIYDHIITNIGNAYDVRDGEFNVPYDGLYTFSVTGMAYTESDMYLTLVKNGVYVHQLYSNS GYADSSTYTMNLYLQAGDAVWVVNSGSSDRLHANDYNCFSGMLVKEK |
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