Gene
| Gene Model ID | pfu_aug2.0_671.1_04470 |
|---|---|
| Locus | scaffold671.1 : 198515 ... 237531 : - |
| To GenomeBrowser | scaffold671.1:198515..237531 |
| Genes list of scaffold | scaffold671.1 |
| Synonym | pfu_aug1.0_8552.1_38782 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_671.1_04470.t1 | 1 | 1 | zf-C3HC4 | 52 | 91 | 9.1e-06 | 25.2 | 1.6e-08 | 1.9e-05 | 24.2 |
| pfu_aug2.0_671.1_04470.t1 | 3 | 1 | A2M_recep | 142 | 161 | 1.2e-13 | 51.0 | 9.3 | 12000.0 | -3.5 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 1 | A2M_N | 218 | 312 | 1.2e-20 | 73.5 | 1.2e-22 | 1.5e-19 | 70.0 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 1 | A2M_N_2 | 221 | 266 | 1.5e-11 | 44.2 | 1.5 | 1800.0 | -1.4 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 2 | A2M_N_2 | 417 | 528 | 1.5e-11 | 44.2 | 7.3e-14 | 9.0e-11 | 41.7 |
| pfu_aug2.0_671.1_04470.t1 | 1 | 1 | A2M | 635 | 726 | 1.7e-24 | 85.1 | 7.1e-27 | 8.8e-24 | 82.9 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 2 | A2M_N | 807 | 841 | 1.2e-20 | 73.5 | 1.2 | 1500.0 | -0.6 |
| pfu_aug2.0_671.1_04470.t1 | 1 | 1 | Thiol-ester_cl | 870 | 893 | 6.9e-12 | 44.3 | 1.2e-14 | 1.5e-11 | 43.3 |
| pfu_aug2.0_671.1_04470.t1 | 1 | 1 | A2M_comp | 913 | 1163 | 0.0 | 230.0 | 0.0 | 0.0 | 229.4 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 1 | Prenyltrans_2 | 924 | 1031 | 6.2e-10 | 39.4 | 7.7e-08 | 9.5e-05 | 22.7 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 1 | NTR | 995 | 1016 | 6.9e-07 | 28.8 | 4.1 | 5100.0 | -3.0 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 2 | Prenyltrans_2 | 1107 | 1165 | 6.2e-10 | 39.4 | 4.0e-05 | 0.05 | 14.0 |
| pfu_aug2.0_671.1_04470.t1 | 3 | 2 | A2M_recep | 1273 | 1295 | 1.2e-13 | 51.0 | 0.00011 | 0.13 | 12.4 |
| pfu_aug2.0_671.1_04470.t1 | 3 | 3 | A2M_recep | 1294 | 1336 | 1.2e-13 | 51.0 | 1.3e-12 | 1.6e-09 | 37.8 |
| pfu_aug2.0_671.1_04470.t1 | 2 | 2 | NTR | 1382 | 1477 | 6.9e-07 | 28.8 | 2.4e-09 | 2.9e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_671.1_04470.t1 | gi|589097373|gb|AHK60744.1| | 0.0 | |
| pfu_aug2.0_671.1_04470.t1 | gi|585720906|ref|XP_006813172.1| | PREDICTED: C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_671.1_04470.t1 | gi|260835742|ref|XP_002612866.1| | hypothetical protein BRAFLDRAFT_129974 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_671.1_04470.t1 | gi|675427050|ref|XP_008927368.1| | PREDICTED: LOW QUALITY PROTEIN: complement C4-A-like [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_671.1_04470.t1 | gi|390352948|ref|XP_780931.3| | PREDICTED: complement C3 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_671.1_04470.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_671.1_04470.t1 atgaccagagaacttctgtggcatgggttttcagagtttctcttctttatcttaccgttagtgaattttcaacgaatcaa aaattttgccactaaacacattttacctaaacctaaaatggacccatccagccaaagacagaaaaatatggaatgtgcca tttgtgggttatacccagttaatccacaagaaataggctgtcatcatatgttctgctattactgtgttcagagtaattac aagtcggacccaggattttgctgtccactatgtggtataaacattccaagtcacgatacaataaaacctttaaggatggt gatagaacctagatatccacgatatctgataatggctcccagtaaactacgttacaacgttcctgaagttatttctatat ctgtaacagagattagaaacctaccagtactggtaaggattcaagattatccccagcggcaacacactgtattcgaaaca tacgtgacagtcaatgaagaccagtttacaggagtatctgtacgaatacatccgaacgatcttccggaaagtgacgaaga ggaccgacaggtgtacttgaccctacagagcacggacccaagtttgcctctgaatgacagtaccgtagttcctctaacaa aggttacaggatacatcttcatacaaaccgataaacctatctacactccagatcaagaagttaagttcagagtaattccg ttggacgatcagagattgccgacgtcggacccagtacagatagatgttgtgaacccacagggcgtggtcatccagcgatg gatatcgacatggcaacagaaatttatctcacatgacttccagctgcccgatattccggtacttggtaaaaactggacaa ttaagacacagtttacctcagatacgctccaaaatggatctgcatcatttgaagtggacatggcggaagtcggtaaaggt ttagaaagtttctggttcccagatggagccaaacttcacatagaggcagaggtactagaaacgacctccggcagaaagga gcgagctatggacatgtctatagtatttgtagaacaaccttttgttctctcagcagacgacagccagaaattcttcaaac caggactcacttatgagttgaagatgaaaaccaaccatccggactatacagacgagcaacaaactgaaattacatttgac accgaggcaagcgtgtcatctagtggacaattcttaaaaatcacatcaacagagatcatgtatggctcgtctattaccga actacacgtcatgccaacattaggaacgagtcctgtcacctatagcgtattaatccagcctttgatgtcaccatacactc gcgtcatagctcactatttcctggaaaatcccactggtccggaaatcgtgtcagactccttgagaatccacctgccgcta cgttttcaagcaggagagctgacattaagttcagaggaagacgtttatttacccggagattcatcgggagctaacattca tgttcgaggggctccgaacagcgttgtcggattcgttgcagtagatgaagctatttacttactcagtgagaaaggcatcc ttaacaaagaactggttgataatttcattctcgcaaagttcagtaaccacccttgttgcgtcgccggggatttattttcc cgaaatatctctgacgtcagtgaatgttatgaagaagggaaggaagtttacacattaacgaacagttcaaaatgctcaaa agtattctacttctgctgtaaaatttattctcctgttagcagtgatccggggaagatggcgaaagttggacagaaggagt acacattttccgatgttgacgacaatgatcagagaaccaaagtgagatccgacttcccggaatcctggatgtttgaggaa gattatttggatcatactggcgaactcattaaaaacgtccaattaccagactccatcacgactcacagactccaagtttt gtcaatatcccctgattatggaataagtatagctgacacaatcaccatagcaacgtacaaagatttctttattgaccttg acctgccgtatagtattgttaggctagagcagacggaggtcagggccatcgtatataactatggaaaccaggcactagat cgagttcgcgtgaggatgaaacaaacagatggtatatgcgcatcaaagtcaaaacgaggctacgttcaagtacgagttcc ggctaacggtgccgagatggtacgatttcctatagttcctcttcgagcaggagagtttgacatcgaaatatcggcaagat tcggaagagttcgggacagaattcgcaagaagattttggtgataaatgaaggacgtgagaaagtaaagtccgtgtcgttt tggctggaccctcttggtcaaaaaggacggacacatcacgaagctaccagaccaacaaatgcctttggcgtacagaaaac ctctgtggaccttatgttgcctgaggaggctataccgggtacaggacgatgtaaggtaaccgctgtagggaatatcatgg acagcacctcgcgaacagtcattgaggatgtggaaaaactgatgaataaactaccgcatggttgtggagagcagacgatg attaaccttgctcctatcgtgtacgccatgaggtacctggtaaacactggacagatcaacgcaaatatggaaaataaagg cgctaggatgattcagagaggttaccagaaggagttgttgtttaggaaagacaatggatcatttagcacttggccccata aacctagcagtacatggttaacggcgttcgttctgaaggtattttgtgaagcccagcgttactctcacattgatcccatg gttatatgcacaggaatggagtatttattgttacggcaacgtcacgacggttcttttgatgatgaataccccgtatatca caaggaaatgttgggaggaaacatcggtcgtgtttcgagaacagcttttatcctcatagctcttctagaatgtgactgcc gccctccggatacagacgaaaagattcgaaaaacagtcttgtacctggagaatagccttgactatataaatcaagtttac cccttgtcaataacaacatatgccctctcattggcatacagcaacaaagcgatggaagccaatgagaagctgaggacatt cgcaatagaacgaccttactccgcaaacagcaatgaaggattgcgatattggactgtatctaatgatatgaatagcatct ctgcgaacctaccacgctggtacagacgatatccggaggctattgatgtggaagtgacgtcatatgctctgctcgcgcag atggagctgaatgaaatacattacagcggaaatatcgtcgaatggttactacagaatcgacagtcctcgggagcttttat ttctacacaggataccattattgcacttcaagccttgaccatgtataacatcaggacatatgccagagatctggatcttc gtctaacattgcagacgacagtgaatgatacattccgccatgatatgactctgtcacaaggtgacatggaaatagagaaa agtgtagacaagattcctttgaatgggaaattaaatgtgaccaccgagggtagcggagttgcccggatggaggttgaggt caggtacaacgtgaatgtcagtgagcacgagacgtgtaaatttcacattgaagtctttgactctgacgtggactacacag atctgcagaaatatggatacagaccacaggactatttaggctacgaaaaattggacatgccaattatagatattggactt ccgactggattcagaccacaacaggatgattttagactgataccaagtgacagggacctttgcttcaaatttagaacagt caaagaatttgaagttgagaatctccagtctgcaaaaatagaagtatttgattactacaagtcagatgagcgatgcgtga agttttacagccttaaatatgacgtagcagacttggatatattttgtagtaggagcgagtgtcactgtgtagatggttcc tgtgcggacaattgggattcaaagctccagttccgtcagatttcaaggagagaactcttacaaagaacatgtcgtgaata tgactatgttgctcgagtcgaagtggctaatgtaatggtgtcgggaaaccatcttatgatttcaactgttgtgcattccg cgataaaagcaggaccaggtaacatacgtgttggcgatgaactagtattttggatgaatctaagatgcacaacatctgtc agcgagggagaattttacattatctatggaaaggcacctattcaatatgtagatgaacaaggatttaaaaggtacagata ctacctacaaggggacacggcgataatgaaggattacgtacgtcaacaatacgccactacagcaacgttacgctactgga gacgcttcctcatgaggctagagaggtacatcaggagaaggggatgttcttga |
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Protein
| Protein ID | pfu_aug2.0_671.1_04470.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_671.1_04470.t1 MTRELLWHGFSEFLFFILPLVNFQRIKNFATKHILPKPKMDPSSQRQKNMECAICGLYPVNPQEIGCHHMFCYYCVQSNY KSDPGFCCPLCGINIPSHDTIKPLRMVIEPRYPRYLIMAPSKLRYNVPEVISISVTEIRNLPVLVRIQDYPQRQHTVFET YVTVNEDQFTGVSVRIHPNDLPESDEEDRQVYLTLQSTDPSLPLNDSTVVPLTKVTGYIFIQTDKPIYTPDQEVKFRVIP LDDQRLPTSDPVQIDVVNPQGVVIQRWISTWQQKFISHDFQLPDIPVLGKNWTIKTQFTSDTLQNGSASFEVDMAEVGKG LESFWFPDGAKLHIEAEVLETTSGRKERAMDMSIVFVEQPFVLSADDSQKFFKPGLTYELKMKTNHPDYTDEQQTEITFD TEASVSSSGQFLKITSTEIMYGSSITELHVMPTLGTSPVTYSVLIQPLMSPYTRVIAHYFLENPTGPEIVSDSLRIHLPL RFQAGELTLSSEEDVYLPGDSSGANIHVRGAPNSVVGFVAVDEAIYLLSEKGILNKELVDNFILAKFSNHPCCVAGDLFS RNISDVSECYEEGKEVYTLTNSSKCSKVFYFCCKIYSPVSSDPGKMAKVGQKEYTFSDVDDNDQRTKVRSDFPESWMFEE DYLDHTGELIKNVQLPDSITTHRLQVLSISPDYGISIADTITIATYKDFFIDLDLPYSIVRLEQTEVRAIVYNYGNQALD RVRVRMKQTDGICASKSKRGYVQVRVPANGAEMVRFPIVPLRAGEFDIEISARFGRVRDRIRKKILVINEGREKVKSVSF WLDPLGQKGRTHHEATRPTNAFGVQKTSVDLMLPEEAIPGTGRCKVTAVGNIMDSTSRTVIEDVEKLMNKLPHGCGEQTM INLAPIVYAMRYLVNTGQINANMENKGARMIQRGYQKELLFRKDNGSFSTWPHKPSSTWLTAFVLKVFCEAQRYSHIDPM VICTGMEYLLLRQRHDGSFDDEYPVYHKEMLGGNIGRVSRTAFILIALLECDCRPPDTDEKIRKTVLYLENSLDYINQVY PLSITTYALSLAYSNKAMEANEKLRTFAIERPYSANSNEGLRYWTVSNDMNSISANLPRWYRRYPEAIDVEVTSYALLAQ MELNEIHYSGNIVEWLLQNRQSSGAFISTQDTIIALQALTMYNIRTYARDLDLRLTLQTTVNDTFRHDMTLSQGDMEIEK SVDKIPLNGKLNVTTEGSGVARMEVEVRYNVNVSEHETCKFHIEVFDSDVDYTDLQKYGYRPQDYLGYEKLDMPIIDIGL PTGFRPQQDDFRLIPSDRDLCFKFRTVKEFEVENLQSAKIEVFDYYKSDERCVKFYSLKYDVADLDIFCSRSECHCVDGS CADNWDSKLQFRQISRRELLQRTCREYDYVARVEVANVMVSGNHLMISTVVHSAIKAGPGNIRVGDELVFWMNLRCTTSV SEGEFYIIYGKAPIQYVDEQGFKRYRYYLQGDTAIMKDYVRQQYATTATLRYWRRFLMRLERYIRRRGCS |
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