Gene
| Gene Model ID | pfu_aug2.0_672.1_07777 |
|---|---|
| Locus | scaffold672.1 : 1 ... 8894 : + |
| To GenomeBrowser | scaffold672.1:1..8894 |
| Genes list of scaffold | scaffold672.1 |
| Synonym | pfu_aug1.0_13576.1_10624 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| structural maintenance of chromosomes protein 5 isoform x2 | GO:0005654 GO:0006302 GO:0006310 GO:0033047 GO:0044427 GO:0045840 GO:0051984 GO:2001252 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_672.1_07777.t2 | 1 | 1 | SMC_N | 139 | 279 | 6.1e-06 | 25.6 | 1.0e-08 | 1.0e-05 | 24.9 |
Transcript
| Transcript ID | pfu_aug2.0_672.1_07777.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_672.1_07777.t1 gaatgtgtaaaattaagtagggagaaaatcatattgagtttgagacatgcaaatattgtacgagaacatgaaaatttggt agcagaactgagagatcagtctcagatcttggaaagaattgagcgagaatttgaaagagccaaatctcatgtcatggaaa ccaaggattgtgctaagaaacttcttgatgctgccaaaaagaaaacaaatactccacagaactcagagttatcaccggaa ctcaaacaagcgtttgaagaccatccacaaacaactctagaagaaatagacagtgcaatacacgaacagagagctagagc agattctttgttccagacagatgaaagggtcatactcgagtatcatgaaaggaaaaaggaaatccacaagctagagtctg atattatagagaaaaagaaaagattagacagtcataaggatgaaatagaggaagtgaagaggaactggattgaacctctg acagatatggtggagaaaattaatgaaaacttcggtcatttcttctcttgtatgaattgtgcgggagaggtggacttaaa tgtaccatcaaaccctgaggactatgagaaatatggaattaagataaaggtgaagttccgtgactctgagatactgagag agctgacagcccagcatcagagtggcggggaaagaagtgtttccactgtattatatatgatggcactacaagagatgacc aaatgtccgttcagatgtgttgatgagatcaatcagggaatggatccaatcaacgagagaaaagtatttgagttggttgt caatacagtctgtaagagatcatgctctcagtatttccttctcacacccaaactcttgccagatttggagtacgcaaaca atatgacagttctatgcgtgtgtaacggacctctaatgctgaaccatacagagtggaatatacagaagtttgtacgtcgc aggcgaagacttcaagaggacgactga |
|
| Transcript ID | pfu_aug2.0_672.1_07777.t2 |
| Definition | - |
>pfu_aug2.0_672.1_07777.t2 gaatgtgtaaaattaagtagggagaaaatcatattgagtttgagacatgcaaatattgtacgagaacatgaaaatttggt agcagaactgagagatcagtctcagatcttggaaagaattgagcgagaatttgaaagagccaaatctcatgtcatggaaa ccaaggattgtgctaagaaacttcttgatgctgccaaaaagaaaacaaatactccacagaactcagagttatcaccggaa ctcaaacaagcgtttgaagaccatccacaaacaactctagaagaaatagacagtgcaatacacgaacagagagctagagc agattctttgttccagacagatgaaagggtcatactcgagtatcatgaaaggaaaaaggaaatccacaagctagagtctg atattatagagaaaaagaaaagattagacagtcataaggatgaaatagaggaagtgaagaggaactggattgaacctctg acagatatggtggagaaaattaatgaaaacttcggtcatttcttctcttgtatgaattgtgcgggagaggtggacttaaa tgtaccatcaaaccctgactatgagaaatatggaattaagataaaggtgaagttccgtgactctgagatactgagagagc tgacagcccagcatcagagtggcggggaaagaagtgtttccactgtattatatatgatggcactacaagagatgaccaaa tgtccgttcagatgtgttgatgagatcaatcagggaatggatccaatcaacgagagaaaagtatttgagttggttgtcaa tacagtctgtaagagatcatgctctcagtatttccttctcacacccaaactcttgccagatttggagtacgcaaacaata tgacagttctatgcgtgtgtaacggacctctaatgctgaaccatacagagtggaatatacagaagtttgtacgtcgcagg cgaagacttcaagaggacgactga |
|
Protein
| Protein ID | pfu_aug2.0_672.1_07777.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_672.1_07777.t1 ECVKLSREKIILSLRHANIVREHENLVAELRDQSQILERIEREFERAKSHVMETKDCAKKLLDAAKKKTNTPQNSELSPE LKQAFEDHPQTTLEEIDSAIHEQRARADSLFQTDERVILEYHERKKEIHKLESDIIEKKKRLDSHKDEIEEVKRNWIEPL TDMVEKINENFGHFFSCMNCAGEVDLNVPSNPEDYEKYGIKIKVKFRDSEILRELTAQHQSGGERSVSTVLYMMALQEMT KCPFRCVDEINQGMDPINERKVFELVVNTVCKRSCSQYFLLTPKLLPDLEYANNMTVLCVCNGPLMLNHTEWNIQKFVRR RRRLQEDD |
|
| Protein ID | pfu_aug2.0_672.1_07777.t2 |
| Definition | - |
>pfu_aug2.0_672.1_07777.t2 ECVKLSREKIILSLRHANIVREHENLVAELRDQSQILERIEREFERAKSHVMETKDCAKKLLDAAKKKTNTPQNSELSPE LKQAFEDHPQTTLEEIDSAIHEQRARADSLFQTDERVILEYHERKKEIHKLESDIIEKKKRLDSHKDEIEEVKRNWIEPL TDMVEKINENFGHFFSCMNCAGEVDLNVPSNPDYEKYGIKIKVKFRDSEILRELTAQHQSGGERSVSTVLYMMALQEMTK CPFRCVDEINQGMDPINERKVFELVVNTVCKRSCSQYFLLTPKLLPDLEYANNMTVLCVCNGPLMLNHTEWNIQKFVRRR RRLQEDD |
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