Gene
| Gene Model ID | pfu_aug2.0_672.1_07785 |
|---|---|
| Locus | scaffold672.1 : 136546 ... 144483 : + |
| To GenomeBrowser | scaffold672.1:136546..144483 |
| Genes list of scaffold | scaffold672.1 |
| Synonym | pfu_aug1.0_13014.1_46590 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_672.1_07785.t1 | 3 | 1 | DDE_3 | 48 | 101 | 6.7e-07 | 29.1 | 7.5e-10 | 5.6e-06 | 26.1 |
| pfu_aug2.0_672.1_07785.t1 | 1 | 1 | PhyH | 173 | 379 | 4.2e-08 | 33.4 | 1.1e-11 | 8.2e-08 | 32.5 |
| pfu_aug2.0_672.1_07785.t1 | 3 | 2 | DDE_3 | 287 | 337 | 6.7e-07 | 29.1 | 0.19 | 1400.0 | -1.1 |
| pfu_aug2.0_672.1_07785.t1 | 3 | 3 | DDE_3 | 385 | 401 | 6.7e-07 | 29.1 | 0.41 | 3000.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_672.1_07785.t1 | gi|676429872|ref|XP_009045742.1| | hypothetical protein LOTGIDRAFT_171297 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_672.1_07785.t1 | gi|524876303|ref|XP_005094869.1| | PREDICTED: uncharacterized protein LOC101849040 [Aplysia californica] | 0.0 |
| pfu_aug2.0_672.1_07785.t1 | gi|676429869|ref|XP_009045741.1| | hypothetical protein LOTGIDRAFT_171296 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_672.1_07785.t1 | gi|524867577|ref|XP_005090599.1| | PREDICTED: uncharacterized protein LOC101861014 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_672.1_07785.t1 | gi|676468337|ref|XP_009058177.1| | hypothetical protein LOTGIDRAFT_101295, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_672.1_07785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_672.1_07785.t1 atgagacagtggaagcaccatggctcaccccggcctgctggtatattatttccaaaaaggacaaacaatcaatggcacat gatatgcttcacttctgacacagttaagggaaaatatcaacttaagcgccgtggaaagcttagtaaaggagtgttgttcc accaggacaatgctcctgttcacaagtctgtcactgtcacggctgccattcgtaattgtgactttaatataattaagcat ccgccttattcacctgatcttgctctatcagactttcatctatttccaaacctgaaagcagctatttctggcacctactg cggtgccgctcaaatgaatcaatgcggtgccgcacataatctatatgagagggtggacaatgtgaaagggagggggagga acggggggaagagggagagaggggagggaaggaggagaaaggtgagggaggcggggggtgagaggggaggtaaggaagtg ggaggggaagagaggtcagacattctagatgagctagaacggaattcgttcgtcgtaattcccgatgttataagcaacac agagtgtaacaagttcataaaagaatacagagaatggtacgggaatttcaagggaaaaagaagagaattcctgcgtcaac gacagtccgtggtacaaaacttctgggttggccatcttgaagcttcgtggaaaataagactgaaagtgaaaccaatattt gaaaaaatatgggagacaactcagctactgaccagtgtggacggagtggccatttctgctcctcctgaagaagaaacaga gggattcaatatgaagaatccagaattccgttcggagaccgattcatggcttcatctggaccaaggaaaaagtagagttg gtcgccatgccattcaaggggcagtatatctggagacgtcatcatcagacgactactgcttccgggtcatgaaagggtca gagaattatcacatagaattccttaacaaaatgaggccaaacattgagcctgatacaactttcatcaaactcaaaccaca cgagatttcttggtttgaggaaaggggatgtgagacaactttcgtcgaagtgcccaaaggaggaatgatcttatgggact ctaggacagtgcacgataaccttcctccaagaagaggacgatcgccaggaaacaggtggcgccatgtttgcttcgttacc atgactccggcaaaatgggccggaccagacgatctggaggttaaaaagagaatgtacaatgaaagactgatgtcttccca ctgggcctctcaaggcattaagattcttggtaactatacagggagaaggaaaaggcggcacgatgggaaactaaaaaggg acaattttatggagatggcagagttaccaactattgcccagagtgacgaagtgaaacaattactaggtgtcaaaagttat gactttttggatggacctccgtcacctaaatggatatcatcctctttattagactttaacaaacctagtgatgctagcaa acgaagtaattaa |
|
Protein
| Protein ID | pfu_aug2.0_672.1_07785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_672.1_07785.t1 MRQWKHHGSPRPAGILFPKRTNNQWHMICFTSDTVKGKYQLKRRGKLSKGVLFHQDNAPVHKSVTVTAAIRNCDFNIIKH PPYSPDLALSDFHLFPNLKAAISGTYCGAAQMNQCGAAHNLYERVDNVKGRGRNGGKRERGEGRRRKVREAGGERGGKEV GGEERSDILDELERNSFVVIPDVISNTECNKFIKEYREWYGNFKGKRREFLRQRQSVVQNFWVGHLEASWKIRLKVKPIF EKIWETTQLLTSVDGVAISAPPEEETEGFNMKNPEFRSETDSWLHLDQGKSRVGRHAIQGAVYLETSSSDDYCFRVMKGS ENYHIEFLNKMRPNIEPDTTFIKLKPHEISWFEERGCETTFVEVPKGGMILWDSRTVHDNLPPRRGRSPGNRWRHVCFVT MTPAKWAGPDDLEVKKRMYNERLMSSHWASQGIKILGNYTGRRKRRHDGKLKRDNFMEMAELPTIAQSDEVKQLLGVKSY DFLDGPPSPKWISSSLLDFNKPSDASKRSN |
|