Gene
| Gene Model ID | pfu_aug2.0_68.1_26769 |
|---|---|
| Locus | scaffold68.1 : 1 ... 7005 : - |
| To GenomeBrowser | scaffold68.1:1..7005 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_39729.1_12387 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26769.t1 | 3 | 1 | RGM_N | 42 | 96 | 2.1e-08 | 34.3 | 3.0e-09 | 4.5e-05 | 23.5 |
| pfu_aug2.0_68.1_26769.t1 | 3 | 2 | RGM_N | 304 | 366 | 2.1e-08 | 34.3 | 0.00012 | 1.7 | 8.6 |
| pfu_aug2.0_68.1_26769.t1 | 3 | 3 | RGM_N | 404 | 439 | 2.1e-08 | 34.3 | 0.0017 | 25.0 | 4.8 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26769.t1 atgaaggcagcttcgatttttcttattgtcctaattctattttttaacggaaagattggcgacggagcaaaatgcgacac cacacagatagaccagtgtaaactgatagtaacgtatgcccaacagaacagctttaatgatacggaattatgttggtctc tgaagtctgctgtagattgtctgacagccctagctccgtcatgccaaaatgattttgactggaaaagcacgatcactgat tacaatagtcaggtcaagcgactcaattgctctaatgcactaacatcacaaatactgccgccgccaacatcacaaccacc gccgccgcctccagaactatcaccgccgccaacatcaccactatcactgccgcctccagaactatatattactgtcgcca acatcaccaccatcaccgccacaaccgccatcaccaccaccgccacaacccaccaccgccactaccaccatcatcatcgc cgcaaaacatcgtcaccgtcacggacatcaccgccaccgccgccgcctctaccttcacagccaccgcaacctacatcgcc actacaacctccagcatcattaccacgatcgccgccgccagtatcatcagcacctccttcatcgccgccgcctccaccgc tatcgccacctatatcgccaccatcaccgcaagcatcatcaccatcatcgtcgctgccgacaatatcatcaccactccca tcacccacaatatcaccgccaccaccgcccacaacatcgtcaccaccattgcctcaactgcctacactaccatcaacgcc accaccaccatacgacttccaaactgcctccgactgttcttcaaagttgggcgacacttgtcgatttacacctgtgtgga tcaatgtggattcttttgtgagtggaaagttgtcacaatgcgcggatgaatactgtaatggtacacagattgatgattgt atgaaagacgccaaagacaccaaaggaaaatccatgccagaaatatgccaagatgttgccaacgctattacctgccttca accgttggagccagggtgtcgtaataattcggattggaataatttgtttgggcagttgaatagcgagagggaccagtgtg ggcttgctgctggttgctttttggatgaagcacgactttgtttgacaaaagatcttggaatttcacttgatggttcaaca gtcccaggcagtatttgtcagaactatccgtcgtttaaatcttgctgggacaaacatgtgacattatgctctcaaaatcc cgtgtttcgttctctacaggcagttgcaaacaattatcatgaatgtcagataa |
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Protein
| Protein ID | pfu_aug2.0_68.1_26769.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26769.t1 MKAASIFLIVLILFFNGKIGDGAKCDTTQIDQCKLIVTYAQQNSFNDTELCWSLKSAVDCLTALAPSCQNDFDWKSTITD YNSQVKRLNCSNALTSQILPPPTSQPPPPPPELSPPPTSPLSLPPPELYITVANITTITATTAITTTATTHHRHYHHHHR RKTSSPSRTSPPPPPPLPSQPPQPTSPLQPPASLPRSPPPVSSAPPSSPPPPPLSPPISPPSPQASSPSSSLPTISSPLP SPTISPPPPPTTSSPPLPQLPTLPSTPPPPYDFQTASDCSSKLGDTCRFTPVWINVDSFVSGKLSQCADEYCNGTQIDDC MKDAKDTKGKSMPEICQDVANAITCLQPLEPGCRNNSDWNNLFGQLNSERDQCGLAAGCFLDEARLCLTKDLGISLDGST VPGSICQNYPSFKSCWDKHVTLCSQNPVFRSLQAVANNYHECQI |
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