Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_68.1_26770
Locus scaffold68.1 : 8806 ... 13216 : +
To GenomeBrowser scaffold68.1:8806..13216
Genes list of scaffold scaffold68.1
Synonym pfu_aug1.0_7239.1_31358

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_68.1_26770.t1 gi|339259912|ref|XP_003368669.1| hypothetical protein Tsp_12929 [Trichinella spiralis] 4.0e-26

Transcript
Transcript IDpfu_aug2.0_68.1_26770.t1
Definition-
>pfu_aug2.0_68.1_26770.t1
atgatggacctttgtgcgacatgtacgaaggaagttaaagatgatgatgaagccgtcacatgtgatgagtgcgacacttg
gaatcacataaaatgcaaaacaggcatctccagtgaagactacaagagatgcttgtccggtaaaatgaagcttagcttca
tatgctgcaagtgcaaatgcattcaagatgtaaatgatgagtgtcttaggaattcattttctttactggaaattggagca
aatgggcaaagttccaccgcgagtagttcagatgacaaactaccatcaccaccacctttaccattgccacccccaccatc
cccaccatcaagtgaaatttctgcttccggtagtctacaattgccttcgccgccttcattctccattgggtcctcccaat
ccctttcatccatgccagcctgtttgagcgatgatgaaagtgatgatgctgtctttgatgaacttcgtgcagagatggca
ctagacagatccttcaatataagctttgaggggagtcaaaggacctccattgagccattagaaaagtctcttgattgttt
actgtcatccactattctggaggaagataaagaaataacgtacaaaatcattgaaaaaggcacaaaacgtggaaggccga
tgttgatatcatcacaaggattttcttacactattaaagtaaaacaagcagctgccaaagacgtgtttaggtctgcttcc
gatattgtggaggaggccttgggacaaatggggccaaatgttgtaaacccacctaagcccgtgaacctagaaagggcggc
aaacctacaccgacaaaattttcgcccaaaggatccagtgaatctagattttgatgttttccaaaagatcaaggaattac
tgggatcatttgcactggaaagcgcagtattagattttgaaaaggcggcatggatagccctgaatgaggttttcccctgt
attgaactgaaaggctgcgtgtttcatttaacacaagccattttccgaaaaatccaagagcttggactaagctgtacata
ctcaaaaaagagttcggtctaccattactgtcgaaagcttatggccctggctttcctcccacataccctcattgaggatg
cattcttgagcttaaaggaacttgccaacagcacagagctgaggaagttattttcatacattgaacaaacttggttcaat
tccacagtggggagtgtgcgtcagtggtgcgtttatagacgtacagtccgcaccaacaatgacgtcgaaggttggcatca
gcgtttgaataagaaggctaagaagagcaatcttcctatgtacctcctcattcacctattgaaggtagaggccaacctag
tggatgttcaggttgccttggtgcacgacgggctgctgagaaggaggcataggagcggttaa

Protein
Protein IDpfu_aug2.0_68.1_26770.t1
Definition-
>pfu_aug2.0_68.1_26770.t1
MMDLCATCTKEVKDDDEAVTCDECDTWNHIKCKTGISSEDYKRCLSGKMKLSFICCKCKCIQDVNDECLRNSFSLLEIGA
NGQSSTASSSDDKLPSPPPLPLPPPPSPPSSEISASGSLQLPSPPSFSIGSSQSLSSMPACLSDDESDDAVFDELRAEMA
LDRSFNISFEGSQRTSIEPLEKSLDCLLSSTILEEDKEITYKIIEKGTKRGRPMLISSQGFSYTIKVKQAAAKDVFRSAS
DIVEEALGQMGPNVVNPPKPVNLERAANLHRQNFRPKDPVNLDFDVFQKIKELLGSFALESAVLDFEKAAWIALNEVFPC
IELKGCVFHLTQAIFRKIQELGLSCTYSKKSSVYHYCRKLMALAFLPHTLIEDAFLSLKELANSTELRKLFSYIEQTWFN
STVGSVRQWCVYRRTVRTNNDVEGWHQRLNKKAKKSNLPMYLLIHLLKVEANLVDVQVALVHDGLLRRRHRSG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495