Gene
| Gene Model ID | pfu_aug2.0_68.1_26771 |
|---|---|
| Locus | scaffold68.1 : 14416 ... 34735 : + |
| To GenomeBrowser | scaffold68.1:14416..34735 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_5890.1_16790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26771.t1 | 2 | 1 | AIF_C | 139 | 173 | 0.0 | 155.7 | 0.043 | 63.0 | 3.8 |
| pfu_aug2.0_68.1_26771.t1 | 3 | 1 | Pyr_redox_3 | 143 | 214 | 2.1e-07 | 31.2 | 0.043 | 64.0 | 3.5 |
| pfu_aug2.0_68.1_26771.t1 | 1 | 1 | Pyr_redox_2 | 186 | 492 | 2.3e-22 | 79.8 | 3.8e-25 | 5.6e-22 | 78.6 |
| pfu_aug2.0_68.1_26771.t1 | 4 | 1 | DAO | 187 | 215 | 6.1e-06 | 25.3 | 0.66 | 980.0 | -1.7 |
| pfu_aug2.0_68.1_26771.t1 | 4 | 2 | DAO | 259 | 317 | 6.1e-06 | 25.3 | 0.00057 | 0.84 | 8.4 |
| pfu_aug2.0_68.1_26771.t1 | 2 | 1 | Pyr_redox | 269 | 294 | 1.9e-08 | 34.5 | 0.25 | 380.0 | 1.5 |
| pfu_aug2.0_68.1_26771.t1 | 3 | 2 | Pyr_redox_3 | 272 | 369 | 2.1e-07 | 31.2 | 4.4e-06 | 0.0065 | 16.5 |
| pfu_aug2.0_68.1_26771.t1 | 2 | 2 | Pyr_redox | 352 | 423 | 1.9e-08 | 34.5 | 6.0e-10 | 8.9e-07 | 29.2 |
| pfu_aug2.0_68.1_26771.t1 | 4 | 3 | DAO | 353 | 369 | 6.1e-06 | 25.3 | 0.18 | 270.0 | 0.2 |
| pfu_aug2.0_68.1_26771.t1 | 4 | 4 | DAO | 392 | 462 | 6.1e-06 | 25.3 | 3.2e-05 | 0.048 | 12.5 |
| pfu_aug2.0_68.1_26771.t1 | 3 | 3 | Pyr_redox_3 | 410 | 461 | 2.1e-07 | 31.2 | 0.0024 | 3.6 | 7.5 |
| pfu_aug2.0_68.1_26771.t1 | 2 | 2 | AIF_C | 515 | 636 | 0.0 | 155.7 | 0.0 | 5.88545e-44 | 149.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26771.t1 | gi|524915427|ref|XP_005112513.1| | PREDICTED: apoptosis-inducing factor 1, mitochondrial [Aplysia californica] | 0.0 |
| pfu_aug2.0_68.1_26771.t1 | gi|632935422|ref|XP_007890044.1| | PREDICTED: apoptosis-inducing factor 1, mitochondrial isoform X3 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_68.1_26771.t1 | gi|632935420|ref|XP_007890043.1| | PREDICTED: apoptosis-inducing factor 1, mitochondrial isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_68.1_26771.t1 | gi|632935418|ref|XP_007890042.1| | PREDICTED: apoptosis-inducing factor 1, mitochondrial isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_68.1_26771.t1 | gi|390364621|ref|XP_783530.3| | PREDICTED: apoptosis-inducing factor 1, mitochondrial [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26771.t1 atgcagcgagtacgaatatctccctccacgctgagacgtggactggcagctatcacactgcatgccaaattattcagtcc tccaccgcagatatgtgctcgttgcctaagccatctaagtaacatcaagtcaaacggcaatgacaagtcctggaatagac atggcagcaccaacagggggcagtacaggtacaagtcaactgagggtggcaagagtcgtagctatggacagtacattatg ggaggcatagctgtaatagctggagggatatttgtattgacagaaggttcatggttcatcaattattatattcgaggcaa tcgtcatcataagaaggatgacagtccaatccaggtgtcgccacatcctctagctatccaggcctcagaggaactgaccc agaaagagaaagaggagatagcagccacagcagtggggagtgtagacagtacgtttgtgaccacaccagtcaccgtgtcc gaggattctaaagagaagaaaacagaggctgcaacaacgccagaagaagaattcccaaaacacattccatacctactgat aggagggggaacaacctctgttggcgcatatagagccataaaagcaaaagaccctaaggcaaagatattggtgataagtc aagaagatacggtaccatatttccgtcctccgctatctaaagaattgtggtttgttgatgacagagaattggccaagaaa tacacgtttaaagactggaatggtaaacagaagacagtattctatgagccacgtccattttactatacacctgagggagt gatgaaggcagaaaatggtggtgtggccttattgtccggcaagaaggtgataaagattaaccccaataaaaagacagtct acattgatgatgggaaagagataacatatgacaaatgtctcatagctacaggtggaagacccagaagtttacccacaata gagaaagcatctcaggaagttaaggataggacagtattattcagaacactgtcagacttcagcaaacttgaggacatggt ccagaagtctaagtctatagcaatcataggtgggggtttccttggtagtgagttggcctgtgctctaggatttagtggaa tgcagactggaatgaaagtttatcaggtttttcctgaagatggtaatcttggtgccgtattacccaaatatcttagcaaa tggacctctagtaagatatcacaaattggtgtagatataatgcctaggaatttcgtaaatgatgcagccttcaaggatgg acaggttcagctaacattatcaagtggatcaaagatatctgtagataatgtggttgtagcagtaggcttgcagccgaaca cagagctagctaagacatcagggctggaggtagacgaaaatcacggaggattccgtgtcaatgctgaactggaggctcgg tcagatatctgggtggctggtgatgcgtcatgcttctatgacatcaagctgggccgtagacgtgttgagcatcatgacca cgccatggttagtggacgactggcaggagaaaacatgaccggagcagccaagccttactggcaccagtctacattctggt cagatttgggaccaactataggttttgaggctattggtataatagactcggaactggaaacagtagcagtatttgacaag gccaccaaggaagcaatagaaggtcagactggacaaaagctcaaggactcgactcccagccaaggaaaggaagggacggt agacaagaagcctgagctgactgtacctggagataatgaggagtatggcaaaggtgtgttattctacctgaaagataagg agatcgtaggaatactactgtggaatctgatgggtcgcatgcatgttgctaggaaggtgcttcgcgacggagctgaaaat gaagatttatatgaagtagccaaacttttcaacattagtgatgccattccgcaggaagaataa |
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Protein
| Protein ID | pfu_aug2.0_68.1_26771.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26771.t1 MQRVRISPSTLRRGLAAITLHAKLFSPPPQICARCLSHLSNIKSNGNDKSWNRHGSTNRGQYRYKSTEGGKSRSYGQYIM GGIAVIAGGIFVLTEGSWFINYYIRGNRHHKKDDSPIQVSPHPLAIQASEELTQKEKEEIAATAVGSVDSTFVTTPVTVS EDSKEKKTEAATTPEEEFPKHIPYLLIGGGTTSVGAYRAIKAKDPKAKILVISQEDTVPYFRPPLSKELWFVDDRELAKK YTFKDWNGKQKTVFYEPRPFYYTPEGVMKAENGGVALLSGKKVIKINPNKKTVYIDDGKEITYDKCLIATGGRPRSLPTI EKASQEVKDRTVLFRTLSDFSKLEDMVQKSKSIAIIGGGFLGSELACALGFSGMQTGMKVYQVFPEDGNLGAVLPKYLSK WTSSKISQIGVDIMPRNFVNDAAFKDGQVQLTLSSGSKISVDNVVVAVGLQPNTELAKTSGLEVDENHGGFRVNAELEAR SDIWVAGDASCFYDIKLGRRRVEHHDHAMVSGRLAGENMTGAAKPYWHQSTFWSDLGPTIGFEAIGIIDSELETVAVFDK ATKEAIEGQTGQKLKDSTPSQGKEGTVDKKPELTVPGDNEEYGKGVLFYLKDKEIVGILLWNLMGRMHVARKVLRDGAEN EDLYEVAKLFNISDAIPQEE |
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