Gene
| Gene Model ID | pfu_aug2.0_68.1_26774 |
|---|---|
| Locus | scaffold68.1 : 92466 ... 105463 : + |
| To GenomeBrowser | scaffold68.1:92466..105463 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_388.1_00285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26774.t1 | 3 | 1 | Nucleos_tra2_C | 160 | 184 | 0.0 | 205.7 | 0.021 | 150.0 | 1.6 |
| pfu_aug2.0_68.1_26774.t1 | 3 | 2 | Nucleos_tra2_C | 238 | 265 | 0.0 | 205.7 | 0.38 | 2800.0 | -2.5 |
| pfu_aug2.0_68.1_26774.t1 | 3 | 3 | Nucleos_tra2_C | 277 | 522 | 0.0 | 205.7 | 0.0 | 0.0 | 205.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_68.1_26774.t1 | gi|395819476|ref|XP_003783111.1| | 0.0 | |
| pfu_aug2.0_68.1_26774.t1 | gi|390336047|ref|XP_792155.3| | 0.0 | |
| pfu_aug2.0_68.1_26774.t1 | gi|545201292|ref|XP_005604988.1| | PREDICTED: solute carrier family 28 member 3-like isoform X2 [Equus caballus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26774.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26774.t1 atggcggtggagctgaaatcattttccccaggacccgggggaaaggaaaacccaacgttcattgatgatgaggaccagca aagcacagttgctcagatcaacgatgtcaagatagatatcaatggaggcaatggaacgatacatggctcgaaaggcgaac aggacgatgatgaagaagaaggaaacggagactgttgttcaagaatgacatatcaaattcaaacagggatccgaaattta catcgccaaaacagtaaactttttaaaggagttatcattttcctattcatcgcactttatttcgcatattttggatatgc gatgtattactcgttcggcgacgagccgtcctggcgtctccttggctttacggtatttgcaatgttgtttataagcggaa gagagttgatgcaatataacgagcataggttggaagaaacttggaagttaagcattcgaccatgtctggattctgcgaac tgcaaaagaagtagaagaataagttctgtgcttctgaagatagttgtggcgggagccattgctgcttttgtcatcattga cgtcatcattgaccatccacaaaacttgatttcatttgctggactcgcaatttacgtggtcttgttctacatttcatctg ttaacccatcaaaggtgctgccaattgtgacgttcttttattctatcatatctttgctgtactatcttggtgtcatgcag tttatagtacgaaacattgggaggtttctagcgttctgtatggggacggcaccaggagagtcacttaatgctgcaggcaa catccttgttggaatggctcctgcaagtcatttattatctgcttcgtttatgtcagcaccagcagccttggccatatcaa aactcagctatccagaactggaattatcgacgtcgtcaaccaaagactactataaaatggggaaggctaaagagaggaac gtattcgaggcagtgtctgtcggagccacaaactctataaagataataggggctatagctgtaaacgtcatggcttttct atccattctccagtttgtggatgccacgctgatgtggttcggggagagggttggatatggtaatattacatttgagttca tctgttcctatcttttctacccatttgccttcttcatgggtgttgaaacaggcgattgtagaagtgtcgctggcttggtt ggaatcaaaactttcgtaaacgaatttgcagcttatgagaagctggggaaactaatagataataataaaaatttcacaat gtacacgcaaagtctgaacttcactgactggtacagggatggagatgacatcattctgccgatggttaatcaaacactga cgtcaggaattcttcagacaaaatcggtcgtcatttcaacatatgcattgtgcgggttctcaaacttcggagctattggt ataatgttgggtggtattggagcgctggctccatcaagaaaaactgacttgtccagaattatgttacgggcaatgatagc agggaacgccgcttgtcttatgacgggatgtatctcaggactgttttataaggactactag |
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Protein
| Protein ID | pfu_aug2.0_68.1_26774.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26774.t1 MAVELKSFSPGPGGKENPTFIDDEDQQSTVAQINDVKIDINGGNGTIHGSKGEQDDDEEEGNGDCCSRMTYQIQTGIRNL HRQNSKLFKGVIIFLFIALYFAYFGYAMYYSFGDEPSWRLLGFTVFAMLFISGRELMQYNEHRLEETWKLSIRPCLDSAN CKRSRRISSVLLKIVVAGAIAAFVIIDVIIDHPQNLISFAGLAIYVVLFYISSVNPSKVLPIVTFFYSIISLLYYLGVMQ FIVRNIGRFLAFCMGTAPGESLNAAGNILVGMAPASHLLSASFMSAPAALAISKLSYPELELSTSSTKDYYKMGKAKERN VFEAVSVGATNSIKIIGAIAVNVMAFLSILQFVDATLMWFGERVGYGNITFEFICSYLFYPFAFFMGVETGDCRSVAGLV GIKTFVNEFAAYEKLGKLIDNNKNFTMYTQSLNFTDWYRDGDDIILPMVNQTLTSGILQTKSVVISTYALCGFSNFGAIG IMLGGIGALAPSRKTDLSRIMLRAMIAGNAACLMTGCISGLFYKDY |
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