Gene
| Gene Model ID | pfu_aug2.0_68.1_26780 |
|---|---|
| Locus | scaffold68.1 : 216971 ... 226499 : - |
| To GenomeBrowser | scaffold68.1:216971..226499 |
| Genes list of scaffold | scaffold68.1 |
| Synonym | pfu_aug1.0_408.1_50845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_68.1_26780.t1 | 2 | 1 | Miro | 24 | 81 | 4.0e-12 | 46.6 | 5.0e-09 | 5.7e-06 | 26.8 |
| pfu_aug2.0_68.1_26780.t1 | 3 | 1 | Ras | 25 | 70 | 2.4e-07 | 30.2 | 2.9e-05 | 0.033 | 13.5 |
| pfu_aug2.0_68.1_26780.t1 | 4 | 1 | Death | 82 | 106 | 1.3e-09 | 37.7 | 0.097 | 110.0 | 2.6 |
| pfu_aug2.0_68.1_26780.t1 | 2 | 2 | Miro | 148 | 211 | 4.0e-12 | 46.6 | 6.1e-06 | 0.0069 | 16.8 |
| pfu_aug2.0_68.1_26780.t1 | 3 | 2 | Ras | 167 | 211 | 2.4e-07 | 30.2 | 5.2e-05 | 0.059 | 12.7 |
| pfu_aug2.0_68.1_26780.t1 | 4 | 2 | Death | 223 | 242 | 1.3e-09 | 37.7 | 0.94 | 1100.0 | -0.6 |
| pfu_aug2.0_68.1_26780.t1 | 3 | 3 | Ras | 239 | 270 | 2.4e-07 | 30.2 | 0.84 | 950.0 | -1.0 |
| pfu_aug2.0_68.1_26780.t1 | 4 | 3 | Death | 430 | 478 | 1.3e-09 | 37.7 | 4.5e-07 | 0.00051 | 19.7 |
| pfu_aug2.0_68.1_26780.t1 | 4 | 4 | Death | 516 | 592 | 1.3e-09 | 37.7 | 0.00072 | 0.82 | 9.4 |
Transcript
| Transcript ID | pfu_aug2.0_68.1_26780.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26780.t1 atggaccagcgttccatagagctttttaacaaatctctggaagaagggcgttataaatgtaatgtaatccgagttatggt agtcggacattatggggttggtaaaaccactctgaccaagaagctgcttggacttagatttgacatgtcacaaaacgaga gcacagatggacttgaaatatatgtgggtcgttgtaatgtggaaacagacagccatacgtggaatacaggggaagaaaac caagataaagggactgatttagcagagcttctccggaaacatggggttatagatgacatgatcaaacgtgtgaaaaaggt ggataaagacgtacaggaggacagcagcaaaccagaacagacaataggtattgttgatgattcagaaaaacaacttgcag ttgattacttcagctctgaggaaatggatgaaacactttctccaagaaaagagctaaagactccaaaatccttaaatcta ctgaaagaaattcttcagaagaaagaagatgaaccagaaaagcgcttcagcatagaggtgtgggactttgggggacaagg atgcttctactgtacacaccagtccttcttgtcctacagatctgtctatttgttggtgtttgatatttccaaggacctgg atgactttgtgaatgatgaagatttagatcctagcgagagaaaaaagtcaacagttagagagtttttgtcattctggata aattccattaaaacctatgctggaggtgtggtacgaggttgcccaaagatcattattgttggaacacatctagataaaat agagaaaagtaagcggctccagaaagttggagaatatctaatggccatctgtgaaacatacgcagaagacatagcaagtg gacagctcatcttagacaacaagttggtgtttggctttaacaatcatggtatagagatccttcaaaatgcaatcattaag gtggccaagggacagcccttctggggagaggagttaccaaaggcatggattcccttccagcataggatatctgtccttcg tcaggacggcaagaagatcatttcttgtaaagaaatcaaggatttcaacctcacattgcctgttccccttgaccttgaga acatagatctttgtctgaggttccttcactctgtgggatctatcatattctactcacagaaagctctatcagcctatgtt attctagagccaaagtgtccctctgacttggagctgatgagatttgccaaaagctggtttggagccaaggataatttagt gctgatcgctgtggaactaggagtcgacatgggggagttggagcaaattgaacatgaccatcgggacaaccttgtgctga agacgttctacatcctggagagatggtcccgtaggagagggaaatcaagctcgttcaaggagctgttagaagcttcccaa tgtgatgtacataccatatgcaagatcatgagggaagatgatgcaagagtgcatcagaccataccaacatccaggcttga agaacaatgcacagacgaaatgatagacaaaatctcagttttgattggtagggatttcatacactttggcttggagctcg gactgcaccaagaagacatagaggaaatcagaaatagcaaagacacacggggactgtttgatatgaaccgaaggataatg atggttacgcgtgatcacagacctggtggtaccagtctcagtgtcaggtccttgtcgtgtgcactgctgaggatcggaca tgtaaaggctttcgaatactttgaggaccagtttatcacagaacatgatgacgatatccaagacgattggtga |
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Protein
| Protein ID | pfu_aug2.0_68.1_26780.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_68.1_26780.t1 MDQRSIELFNKSLEEGRYKCNVIRVMVVGHYGVGKTTLTKKLLGLRFDMSQNESTDGLEIYVGRCNVETDSHTWNTGEEN QDKGTDLAELLRKHGVIDDMIKRVKKVDKDVQEDSSKPEQTIGIVDDSEKQLAVDYFSSEEMDETLSPRKELKTPKSLNL LKEILQKKEDEPEKRFSIEVWDFGGQGCFYCTHQSFLSYRSVYLLVFDISKDLDDFVNDEDLDPSERKKSTVREFLSFWI NSIKTYAGGVVRGCPKIIIVGTHLDKIEKSKRLQKVGEYLMAICETYAEDIASGQLILDNKLVFGFNNHGIEILQNAIIK VAKGQPFWGEELPKAWIPFQHRISVLRQDGKKIISCKEIKDFNLTLPVPLDLENIDLCLRFLHSVGSIIFYSQKALSAYV ILEPKCPSDLELMRFAKSWFGAKDNLVLIAVELGVDMGELEQIEHDHRDNLVLKTFYILERWSRRRGKSSSFKELLEASQ CDVHTICKIMREDDARVHQTIPTSRLEEQCTDEMIDKISVLIGRDFIHFGLELGLHQEDIEEIRNSKDTRGLFDMNRRIM MVTRDHRPGGTSLSVRSLSCALLRIGHVKAFEYFEDQFITEHDDDIQDDW |
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